Monarch geneset OGS2.0

DPOGS204239
TranscriptDPOGS204239-TA1716 bp
ProteinDPOGS204239-PA571 aa
Genomic positionDPSCF300046 - 512427-516678
RNAseq coverage1987x (Rank: top 6%)
Annotation
HeliconiusHMEL0040660.092.48% 
BombyxBGIBMGA007516-TA0.099.09% 
DrosophilaEf1alpha100E-PB0.092.71% 
EBI UniRef50UniRef50_P087360.091.80%Elongation factor 1-alpha 1 n=5691 Tax=root RepID=EF1A1_DROME
NCBI RefSeqXP_966355.10.093.85%PREDICTED: similar to putative elongation factor 1-alpha isoform 1 [Tribolium castaneum]
NCBI nr blastpgi|910947970.093.85%PREDICTED: similar to putative elongation factor 1-alpha isoform 1 [Tribolium castaneum]
NCBI nr blastxgi|1953904310.093.39%GJ23103 [Drosophila virilis]
Group
Gene OntologyGO:00037461.2e-221translation elongation factor activity
GO:00064141.2e-221translational elongation
GO:00055251.2e-221GTP binding
GO:00057371.2e-221cytoplasm
GO:00039247.2e-56GTPase activity
KEGG pathway 
InterPro domain[1-439] IPR0045391.2e-221Translation elongation factor EF1A, eukaryotic/archaeal
[5-227] IPR0007957.2e-56Protein synthesis factor, GTP-binding
[337-443] IPR0090014.3e-40Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
[334-439] IPR0041601.7e-32Translation elongation factor EFTu/EF1A, C-terminal
[237-333] IPR0090007.9e-30Translation elongation/initiation factor/Ribosomal, beta-barrel
[260-326] IPR0041613.5e-17Translation elongation factor EFTu/EF1A, domain 2
Orthology groupMCL10179 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204239-TA
ATGGGCAAGGAAAAGACGCACATCAACATCGTTGTGATCGGTCACGTGGACTCCGGCAAGTCCACTACTACCGGCCATCTGATTTATAAGTGTGGTGGAATCGATAAGCGTACTATCGAGAAGTTTGAGAAGGAGGCGCAGGAGATGGGCAAGGGCTCGTTCAAGTACGCCTGGGTGCTGGACAAGCTAAAGGCGGAGCGCGAACGTGGTATCACCATTGATATTGCCTTGTGGAAGTTCGAGACTGCCAAGTACTACGTTACCATCATCGACGCCCCTGGCCATAGAGACTTCATCAAGAACATGATCACTGGAACCTCGCAGGCGGACTGCGCCGTGCTGATAGTTGCGGCTGGTACGGGTGAGTTCGAGGCCGGCATCAGTAAGAACGGTCAGACCCGCGAGCACGCGCTGTTAGCTTTTACCCTGGGGGTGAAGCAACTGATCGTGGGCGTCAACAAGATGGACTCCACCGAGCCGCCGTACCATGAGGCGAGATACGAGGAGATCAAGAAGGAAGTGTCCTCTTACATCAAGAAGATCGGGTACAACCCGGCGACCGTGGCGTTCGTGCCCATCTCGGGCTGGCACGGAGATAACATGTTGGAGCCTTCGGACAAGATGCCCTGGTTCAAGGGGTGGACCATTGACCGCAAGGACGGGAAAGTGGAGGGCAAGTGCCTCATTGAGGCCCTGGACGCTATCCAGCCTCCGTCTCGTCCCACCGAGAAGCCGCTGCGTCTTCCTCTGCAGGACGTGTACAAGATCGGAGGCATCGGGACAGTGCCCGTAGGACGAGTCGAGACCGGCATCCTGAAACCCGGCATGGTGGTTGTGTTCGCGCCCGCGGCCATCACCACCGAGGTGAAGTCTGTGGAGATGCACCACGAGGCCTTGCAGGAGGCGATGCCTGGAGACAACGTGGGCTTCAACGTGAAGAACGTGTCGGTGAAGGAGTTGCGTCGCGGCTACGTGGCCGGTGACTCCAAGAACTGCCCGCCCAAGGGTGCTTCGGACTTCACCGCCCAGGTGATCGTGTTGAACCACCCGGGGCAGATCAGCAACGGCTATACCCCGGTGCTGGACTGTCACACCGCTCACATCGCCTGCAAGTTCGCTGAGATCAAGGAGAAGTGCGACCGTCGTACTGGCAAGACGACCGAGGTGGAGCCGAAGTCCATCAAGTCCGGCGACGCGGCCATCGTCACCCTAGTGCCGACCAAGGCGCTGTGTGTGGAGTCGTTCCAGGAGTTCCCGCCGCTGGGACGCTTCGCCGTCCGGGACATGCGTCAGACGGTTGCCGTTGGAGTCATCAAGGTACCCCAGCGTGTATACCCCCGGTCTCCCCCGCGGCCTCCCAGCCCGATCGCCTACGGCGTCCCCATTCCCAACGTAGAGTCAGTGTCCCCCCCCAATCGGAGCTTCTTCGCTGGTGACATCGACCCCGGACCCACCTCAGGTAAGTTACTGGAGAAGTTTGAGTTGCCGTACTTGTTGTCGCGGTTCGTTTTATTTTTCCATCGCAAGGAGTTCAGGAGGAAAGACGACGGCGGCGAATTTAAAATTGAACTTTTAAGCCTTTTAGAAGTTTTGTTGTATGAGACTCTGCTCCTGTACGCCATCATAACTAAATTGCTTAAGATCGTACTGAACATCTCGTCCTTGTTTCTGTTAGATTGGTCGTTCCTGTTGAAACTTGACTCTGATATTTTATGA

Protein sequence:

>DPOGS204239-PA
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKKIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPSRPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEALQEAMPGDNVGFNVKNVSVKELRRGYVAGDSKNCPPKGASDFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEVEPKSIKSGDAAIVTLVPTKALCVESFQEFPPLGRFAVRDMRQTVAVGVIKVPQRVYPRSPPRPPSPIAYGVPIPNVESVSPPNRSFFAGDIDPGPTSGKLLEKFELPYLLSRFVLFFHRKEFRRKDDGGEFKIELLSLLEVLLYETLLLYAIITKLLKIVLNISSLFLLDWSFLLKLDSDIL-