Monarch geneset OGS2.0

DPOGS204333
TranscriptDPOGS204333-TA1812 bp
ProteinDPOGS204333-PA603 aa
Genomic positionDPSCF300142 - 32556-37964
RNAseq coverage2014x (Rank: top 6%)
Annotation
HeliconiusHMEL0053970.083.02% 
BombyxBGIBMGA007230-TA0.089.03% 
DrosophilaElf-PA0.070.14% 
EBI UniRef50UniRef50_Q9VK850.070.14%Ef1alpha-like factor n=50 Tax=Metazoa RepID=Q9VK85_DROME
NCBI RefSeqNP_001040118.10.088.87%Ef1alpha-like factor isoform 1 [Bombyx mori]
NCBI nr blastpgi|1140530330.088.87%Ef1alpha-like factor isoform 1 [Bombyx mori]
NCBI nr blastxgi|1140530330.089.53%Ef1alpha-like factor isoform 1 [Bombyx mori]
Group
Gene OntologyGO:00055259.2e-45GTP binding
GO:00039249.2e-45GTPase activity
KEGG pathway 
InterPro domain[177-375] IPR0007959.2e-45Protein synthesis factor, GTP-binding
[497-603] IPR0090011.7e-30Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
[494-601] IPR0041603.5e-23Translation elongation factor EFTu/EF1A, C-terminal
[400-494] IPR0090001.3e-22Translation elongation/initiation factor/Ribosomal, beta-barrel
[421-488] IPR0041612.7e-06Translation elongation factor EFTu/EF1A, domain 2
Orthology groupMCL10679 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204333-TA
ATGTCCAATAACGGTGCTCCGGACTCTTGGGAAGCTCAAGCCGATGTTATAGGTGAACAAGGTGCAAAAGATTCTAATGATGTGTCTACAAAATTTTCCACGTTGAATGTTAATGCTGTGGAATTCGTGCCTTCTTTCTGTATACCTTCCCAAGGTGACGACAGTACTGATTCACCGACTTCATCACAAAAATCTGAGAGTGAATCTACTAATTCCGCTGAGAGTCCTGTCTTGAACGGTTGTGGAGATGGTGTCGAGAGTGGTGATGGAAGAGCAGCATCTGCATCACCGAGAGTTGAGGAGCCCCCTCCTGTCCCTCCAGCTGCCTCCACTGAGACACCTGTTCCTGTTCCATCTGACGTCTCCCCCACAGCTGATAGCTGGGAAGCTGAAGCCGACGATGCATTACTCACACCAGAAGACACCAATGAAGTCGAGGAGGAAGAACTCGAACAACAGGAAGATGGTGAAATCTCAAAGAAAATTCCGAAGAAAAAACCAGTCAGGGTTGAAGATACTCGCAGCAAAAAGGAACATGTAAATGTTGTTTTCATAGGGCATGTAGATGCTGGTAAATCTACAATTGGTGGTCAAATAATGTCCTTGACTGGCATGGTAGATAAAAGAACACTAGACAAATATGAAAGAGAAGCAAGGGAAAAGTCCAGGGAATCTTGGTACCTCTCTTGGGCTTTAGATACGAACCAAGAAGAACGTGACAAAGGTAAAACTGTGGAAGTGGGCAGGGCATACTTTGAGACTGAAAAGAAGCATTTTACAATCCTCGACGCCCCCGGGCATAAGAGTTTCGTTCCAAACATGATAGGGGGCGCCGCGCAGGCCGACCTCGCTGTACTTGTGATATCTGCTAGGAAAGGTGAATTTGAAACAGGATTTGACAGAGGGGGACAAACAAGAGAGCATGCTATGTTAGCAAAGACTGCTGGTGTTAAGCATTTAGTTGCACTTGTTAATAAAATGGATGATCCCACTGTGAACTGGGATGAGAAAAGATACAATGAATGTAGAGATAAAATTCTTCCCTATCTAAAAAAACTGGGATTCAATCCAGCAAAGGACTTATCCTTCTTACCAGTTTCGGGACAAACTGGTCAAGGTTTACTTGAGAGAGTATCCGAAGAAATATGTACGTGGTACCGTGGTCCATCTTTTATACAATTAATTGATGAGTTGCCATCACTGAACCGCAAGATGGATGGTCCCTTCATAATGCCGGTAGTCGACAAGTACAAGGACATGGGAACGGTTCTCATGGGTAAAGTTGAAGCGGGAACTACAAGAAAGGGCAGCACTCTTTTCCTTATGCCTAATAGGGCACAAGTAACAGTCGATCAGTTATGGTCTGACGACATTGAAGTAACCTCTATTGGTCCCGGTGAAAATGTTAAAGTGAAGCTCAAAGGCATCGAAGAAGAAGATGTCTCTCCCGGCTTTGTTCTTTGTGATACCGCAGAACCAATAACCACTGGAAGAGTATTTGATGCTCAAGTGGTGATATTGGAACATAAATCAATCATTTGCGCTGGATATTCCGCTGTTATGCACATACATTGTGCGGCTGAAGAAGTTACTGTTAAGGCTCTAATCTGTTTAGTTGACAAGAAGACTGGTGAGAAGTCAAAGACGCGGCCGCGGTTCGTTAAACAGGATCAAGTGGCCATTATGAGGATAGAATGTGCGGGGATCATATGTCTAGAGCCGTTCAAGAAGTTCGCACAGATGGGAAGGTTCACATTAAGAGATGAAAATAAAACAATTGCAATCGGCAAAGTCCTAAAAGTGGTTGAATAA

Protein sequence:

>DPOGS204333-PA
MSNNGAPDSWEAQADVIGEQGAKDSNDVSTKFSTLNVNAVEFVPSFCIPSQGDDSTDSPTSSQKSESESTNSAESPVLNGCGDGVESGDGRAASASPRVEEPPPVPPAASTETPVPVPSDVSPTADSWEAEADDALLTPEDTNEVEEEELEQQEDGEISKKIPKKKPVRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLDKYEREAREKSRESWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFETGFDRGGQTREHAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECRDKILPYLKKLGFNPAKDLSFLPVSGQTGQGLLERVSEEICTWYRGPSFIQLIDELPSLNRKMDGPFIMPVVDKYKDMGTVLMGKVEAGTTRKGSTLFLMPNRAQVTVDQLWSDDIEVTSIGPGENVKVKLKGIEEEDVSPGFVLCDTAEPITTGRVFDAQVVILEHKSIICAGYSAVMHIHCAAEEVTVKALICLVDKKTGEKSKTRPRFVKQDQVAIMRIECAGIICLEPFKKFAQMGRFTLRDENKTIAIGKVLKVVE-