DPOGS204469 | ||
---|---|---|
Transcript | DPOGS204469-TA | 333 bp |
Protein | DPOGS204469-PA | 110 aa |
Genomic position | DPSCF300002 + 585589-585921 | |
RNAseq coverage | 107x (Rank: top 60%) |
Annotation | ||||
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Heliconius | % |   | ||
Bombyx | BGIBMGA007811-TA | 3e-33 | 56.36% |   |
Drosophila | CG30093-PA | 2e-08 | 39.06% |   |
EBI UniRef50 | UniRef50_Q7PWU3 | 2e-08 | 36.14% | AGAP008850-PA (Fragment) n=1 Tax=Anopheles gambiae RepID=Q7PWU3_ANOGA |
NCBI RefSeq | XP_319592.3 | 3e-09 | 36.14% | AGAP008850-PA [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|118791154 | 9e-08 | 36.14% | AGAP008850-PA [Anopheles gambiae str. PEST] |
NCBI nr blastx | gi|118791154 | 3e-07 | 36.62% | AGAP008850-PA [Anopheles gambiae str. PEST] |
Group | ||||
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Gene Ontology | GO:0004129 | 5.4e-15 | cytochrome-c oxidase activity | |
GO:0005743 | 5.4e-15 | mitochondrial inner membrane | ||
GO:0005751 | 5.4e-15 | mitochondrial respiratory chain complex IV | ||
KEGG pathway | ptr:742678 | 1e-06 |   | |
  | K02266 (COX6A) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Cardiac muscle contraction | |
  |   |   | Parkinson's disease | |
InterPro domain | [32-100] IPR001349 | 5.4e-15 | Cytochrome c oxidase, subunit VIa | |
Orthology group | MCL30522 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204469-TA
ATGGTTCCTGGAGCCAGCAGCCAAATCCGACCTCCAGTAGAATGTCGACCTATTAAAATACCACCAAACCCATGCTGTCCACGTTTTCATCAAGCTAATTGGAGAAAGTATAAGCTTTTATTTTTCTTAGTATGTCTACCGTTAATCCTTATTCAATGTTTTAATACATGTGGACATAAAACACCTGACAAGGGTGAATGTCGAGACTTCGAATATATGCGCCTACGTTTTAAAAAGTATCCTTGGAGAGATGGTATTCAGACTTTTTTTCATAATGAAAGAGTAAACCACGTGCCGGGTGAATGTACGCCCCCACCTCTAGATTGTGATTGA
>DPOGS204469-PA
MVPGASSQIRPPVECRPIKIPPNPCCPRFHQANWRKYKLLFFLVCLPLILIQCFNTCGHKTPDKGECRDFEYMRLRFKKYPWRDGIQTFFHNERVNHVPGECTPPPLDCD-