Monarch geneset OGS2.0

DPOGS204483
TranscriptDPOGS204483-TA1215 bp
ProteinDPOGS204483-PA404 aa
Genomic positionDPSCF300002 + 1081082-1084397
RNAseq coverage233x (Rank: top 44%)
Annotation
HeliconiusHMEL0156900.091.47% 
BombyxBGIBMGA007825-TA0.090.87% 
Drosophilacm-PA0.076.68% 
EBI UniRef50UniRef50_Q9Y2T22e-17267.39%AP-3 complex subunit mu-1 n=158 Tax=Opisthokonta RepID=AP3M1_HUMAN
NCBI RefSeqXP_968876.10.081.97%PREDICTED: similar to GA15778-PA [Tribolium castaneum]
NCBI nr blastpgi|910918620.081.97%PREDICTED: similar to GA15778-PA [Tribolium castaneum]
NCBI nr blastxgi|910918620.081.97%PREDICTED: similar to GA15778-PA [Tribolium castaneum]
Group
Gene OntologyGO:00068863e-148intracellular protein transport
GO:00301313e-148clathrin adaptor complex
GO:00161923e-148vesicle-mediated transport
GO:00055154.9e-74protein binding
GO:00068104.4e-41transport
KEGG pathwaytca:6573170.0 
 K12398 (AP3M)maps-> Lysosome
InterPro domain[1-404] IPR0013923e-148Clathrin adaptor, mu subunit
[163-404] IPR0089684.9e-74Clathrin adaptor, mu subunit, C-terminal
[1-139] IPR0110124.4e-41Longin-like
Orthology groupMCL11413 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204483-TA
ATGATTCACAGTTTATTTATTATAAATCCTGCTGGAGATGTGTTTTTAGAAAAGCATTGGCGAAGTGTTATTCCTAGATCAGTATGTGATTATTACTTAGAAGCTCAGAGAGCTTCGCCTAATGATGTCCCTCCAGTGATAGCTGCCCCCCATCATTATTTAATTTCAATTCAGAGAGGAGGTGTTGCCCTAGTGGCTGTTAGCAAACAAGAGGTGCCTCCTCTTTTTGTTATTGAATTCCTACATAGAGTTGTGGATACATTCCAGGATTACTTTTCTGATTGCACTGAAACAATTATTAAGGAGAACTATGTTGTTGTTTATGAGCTGTTGGATGAGATGTTAGACAATGGTTTTCCATTGGCCACCGAGAGCAACATTTTGAAGGAATTGATAAAACCACCTAATATATTTAGAACAATAGCCAACACTGTGACAGGCAAATCAAATGTATCATCAATATTACCTGGTGGACAACTTTCTAATGTGCCATGGCGTAGAACGGGAGTCAAGTATGCTAATAATGAAGCGTACTTTGATGTTATTGAGGAAGTTGATGCAATTATAGATAAAAGTGGATCTACTGTATCTGCTGAAATACAGGGATATATTGACTGCTGTATCAAGCTGAGTGGTAAGCCAGATCTGACCTTGTCATTCGTGAATCCAAGGCTGTTTGATGATGTATCTTTCCACCCTTGTGTGAGATTTAAAAGATGGGAGTCTGAAAGAATATTATCTTTCATACCACCGGATGGTAACTTCAGACTGATGTCATATCACATTGGTTCACAAAGTGTTGTGGCAATTCCTATCTATGTGAGACATAATCTATCATTACGAACCAATGGGGATCAAGGGCGATTTGACATGACTGTTGGTCCTAAACAAACCATGGGCAGGACCTTGGAAAATGTAGCCTTAGAGATCTGTATGCCAAAATGTGTTCTCAACTGTTCACTAACTGCTAATCAAGGAAAATATTCATATGATCCGGTTAGTAAAGTATTGTTGTGGGACATTGGACGTATTGAACTACCGAAGTTGCCGAATATACGAGGAACTGTGTCCCTAGCATCAGTTCACTTTACTATACCCCAATTAGCGGTGAGCGGTTTGAGAGTCAGTCGGCTTGATATGTACGGAGCTAAATACAAGCCGTTCAAAGGTGTCAAATATGTCACCAAGGCTGGCAAGTTCCATGTTAGAATGTAA

Protein sequence:

>DPOGS204483-PA
MIHSLFIINPAGDVFLEKHWRSVIPRSVCDYYLEAQRASPNDVPPVIAAPHHYLISIQRGGVALVAVSKQEVPPLFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLDNGFPLATESNILKELIKPPNIFRTIANTVTGKSNVSSILPGGQLSNVPWRRTGVKYANNEAYFDVIEEVDAIIDKSGSTVSAEIQGYIDCCIKLSGKPDLTLSFVNPRLFDDVSFHPCVRFKRWESERILSFIPPDGNFRLMSYHIGSQSVVAIPIYVRHNLSLRTNGDQGRFDMTVGPKQTMGRTLENVALEICMPKCVLNCSLTANQGKYSYDPVSKVLLWDIGRIELPKLPNIRGTVSLASVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVRM-