DPOGS204538 | ||
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Transcript | DPOGS204538-TA | 318 bp |
Protein | DPOGS204538-PA | 105 aa |
Genomic position | DPSCF300297 - 218559-220295 | |
RNAseq coverage | 2x (Rank: top 91%) |
Annotation | ||||
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Heliconius | HMEL016573 | 9e-48 | 98.82% |   |
Bombyx | % |   | ||
Drosophila | CG11985-PA | 3e-43 | 90.59% |   |
EBI UniRef50 | UniRef50_B7QIF0 | 2e-37 | 82.35% | Pre-mRNA splicing factor SF3B 10 kDa subunit, putative n=15 Tax=root RepID=B7QIF0_IXOSC |
NCBI RefSeq | XP_002069726.1 | 5e-42 | 91.76% | GK11422 [Drosophila willistoni] |
NCBI nr blastp | gi|68051667 | 1e-41 | 87.78% | IP03424p [Drosophila melanogaster] |
NCBI nr blastx | gi|68051667 | 1e-40 | 87.78% | IP03424p [Drosophila melanogaster] |
Group | ||||
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KEGG pathway | dwi:Dwil_GK11422 | 2e-41 |   | |
  | K12832 (SF3B5, SF3B10) | maps-> | Spliceosome | |
InterPro domain | [21-105] IPR009846 | 9.3e-66 | Splicing factor 3B subunit 5/RDS3 complex subunit 10 | |
Orthology group | MCL14541 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204538-TA
ATGGACTGTCTCAAGTGGACAGATTCATCCACCGTCGCCCTCACCAACGACAGATGTAAAATGGGTGAAAGATACAATATACACAGCCAGCTAGAACATTTACAGAGCAAGTACATAGGAACGGGGCATGCTGATACCACGAAGTACGAGTGGCTTACGAACCAGCATCGAGATTCATGTTGCAGCTACATGGGGCATCCGGATATACTGAGTTACTTTGCTATAGTTGAAAACGAGTCCAAAGCGAGGGTGAAGTTCAATTTGATGGAGAGAATGCTCCAACCTTGCGGTCCACCGCCGGAGAAACCGGAAGATTGA
>DPOGS204538-PA
MDCLKWTDSSTVALTNDRCKMGERYNIHSQLEHLQSKYIGTGHADTTKYEWLTNQHRDSCCSYMGHPDILSYFAIVENESKARVKFNLMERMLQPCGPPPEKPED-