Monarch geneset OGS2.0

DPOGS204549
TranscriptDPOGS204549-TA921 bp
ProteinDPOGS204549-PA306 aa
Genomic positionDPSCF300297 + 221428-222675
RNAseq coverage0x (Rank: top 96%)
Annotation
HeliconiusHMEL0165721e-11370.31% 
BombyxBGIBMGA004504-TA7e-11364.47% 
DrosophilaMtr3-PA8e-2835.32% 
EBI UniRef50UniRef50_Q1HPJ21e-8262.25%MRNA transport regulator 3 n=1 Tax=Bombyx mori RepID=Q1HPJ2_BOMMO
NCBI RefSeqNP_001093283.12e-8362.25%mRNA transport regulator 3 [Bombyx mori]
NCBI nr blastpgi|1537913394e-8262.25%mRNA transport regulator 3 [Bombyx mori]
NCBI nr blastxgi|1537913399e-8762.65%mRNA transport regulator 3 [Bombyx mori]
Group
KEGG pathwayaag:AaeL_AAEL0066979e-70 
 K12587 (EXOSC6, MTR3)maps-> RNA degradation
InterPro domain[41-186] IPR0205683.8e-33Ribosomal protein S5 domain 2-type fold
[50-179] IPR0012477.6e-31Exoribonuclease, phosphorolytic domain 1
Orthology groupMCL12689 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204549-TA
ATGCCACTGGATTATAGAAGATTTAATGGACCAGAAGACAGTGTATCGTACAGGCGTTTCACAGAGGATTATACGAAGGATTATAAGCAATTTCTTAAGGAATTAATCGACGAGAATGGACGTCGGAAAGGAGGGCGCGAAATGGATGAAGCGCGTACCTTGTTTGCTAGAACGGGAATGATATCACAAGCTAAGGGATCATCTTATATAGAACTAAAGAGAACAAAAGTCGCATGTTCTGTGTTTGATCCAAGGGAAATTGTACACCAGAATGAATACAGTACCCTTGGACAGTTGTATTGTGAAGTTAAATATGCACCTTTCTCATGTCGGGGAGAACGGAAAGCTCTCGTTCCAGATTCAGATGAGAGGGCATTATCAGTGGCTCTCAAAAAGGCCTTAGAACCTGCTGTTTGCAGACATCTGTTCCCAAATTATCAGATCGACATATTCATATACATTCTAGAAAATGATGGAGCATGTCTGCCAGCAGCAATAAATGCAGCGGGATTGGCTTTATCAGATGCAGCTGTACCAATGTATGATATTATAACCGCTAGTTCTCTCGCTATAAGCGGAGACAAGGTGTTTGTCGACCCTACAGATGATGAGGAACAATTAGCGATCAGAGACCACGAAGGTGTAAACCACGGTGTGATCACTATGTCAATGTTGCCGGAGTTACAACAAGTGTCAGATTACCGACAGATTGGCTCGATGGATGCCGATTGTGTTTTAAATGCACTTAGCATTCTTGAAAAGGAATGTAAGAAAATTGTTCCATATGTACAGAGAGTTCTCGTGCAGAATGCCATTAATAGTTTCGAACAACAAAAAAAGTTGGAAGCGCAAGCAAAGGAGAGAGAGGAAGCCTTGAATGCAAAAATGGAAGTCTGGAAATCTATATTAAATGTTGGATAG

Protein sequence:

>DPOGS204549-PA
MPLDYRRFNGPEDSVSYRRFTEDYTKDYKQFLKELIDENGRRKGGREMDEARTLFARTGMISQAKGSSYIELKRTKVACSVFDPREIVHQNEYSTLGQLYCEVKYAPFSCRGERKALVPDSDERALSVALKKALEPAVCRHLFPNYQIDIFIYILENDGACLPAAINAAGLALSDAAVPMYDIITASSLAISGDKVFVDPTDDEEQLAIRDHEGVNHGVITMSMLPELQQVSDYRQIGSMDADCVLNALSILEKECKKIVPYVQRVLVQNAINSFEQQKKLEAQAKEREEALNAKMEVWKSILNVG-