MonarchBase - Protein-coding gene

DPOGS204567
Transcript	DPOGS204567-TA	1611 bp
Protein	DPOGS204567-PA	536 aa
Genomic position	DPSCF300300 - 217685-222384
RNAseq coverage	650x (Rank: top 20%)

Annotation
*Heliconius*	HMEL008380	0.0	89.00%
*Bombyx*	BGIBMGA001542-TA	6e-180	77.56%
*Drosophila*	rump-PA	8e-75	48.06%
EBI UniRef50	UniRef50_Q6A1B2	2e-104	45.00%	Hrp59 protein (Fragment) n=2 Tax=Pancrustacea RepID=Q6A1B2_CHITE
NCBI RefSeq	XP_001603370.1	1e-94	44.05%	PREDICTED: similar to myelinprotein expression factor [Nasonia vitripennis]
NCBI nr blastp	gi\|50880296	7e-104	45.00%	Hrp59 protein [Chironomus tentans]
NCBI nr blastx	gi\|170053209	1e-119	48.30%	myelin expression factor 2 [Culex quinquefasciatus]

Group
Gene Ontology	GO:0003676	4.2e-20	nucleic acid binding
	GO:0000166	5.3e-20	nucleotide binding
KEGG pathway	rno:116655	1e-40
	K12887 (HNRNPM)	maps->	Spliceosome
InterPro domain	[39-112] IPR000504	4.2e-20	RNA recognition motif domain
	[12-119] IPR012677	5.3e-20	Nucleotide-binding, alpha-beta plait
Orthology group	MCL16178		Insect specific

Nucleotide sequence:

>DPOGS204567-TA
ATGGACAGCCAAAGAGAGAAGGAGAGGGACCGGTCAAGACGAGGGGACAGACCCTCAAGGTTCTCAGATGCACCGAGAGATCGTTCCAACGACCGTGATAGATCGGAGGGGAAACGATTATTTGTCTCAAATATACCTTATGAATTTCGCTGGACAGAACTAAAAGACTTATTCAAAGAGAAGGTTGGTGATGTAGCCTATGTTGAACTTTTTAATGATGAAAATGGAAAACCAAGAGGATGTGGTGTTGTGGAATTCTCAAATTCTGAAGCTATGAAGAAAGCCCTTTTTGTAATGCATAGATATGAATTGAATGGAAGGAAACTTGTTTTAAAAGAAGAAACAGGTAATGAGAGAAACAGATTAAACTCTGTCAGGTCTGGCGGTGGGGGTGGTGGGAGAAATATGAGAGAAGATAAAGATGGATGGGGAGTTAACAAGCCAAGGGAACCAGAAAATTTTAATACTTATGGTTTAAGTCTACAGTTCTTAGAATCCATAAATGTGCAGCCGCCTTTAGTAAAAAAAGTTTTTGTTGCAAATCTGGACTATAAAGCAGATAGAGCTAAAATTAAGGAAGTATTTAAAATGGCTGGTAAAGTTAGAAACATTGATTTAGCTATTGATAAGGATGGAAACAGTAGAGGCTTTGCTGTTATTGAATATGATCATCCTGTAGAAGCTGTACAGGCAATATCAATGTTTGACAAACAAATGTTATATGAGCGTAGAATGACAGTAAGAATGGATAGGGGAGTGACAGATAAATCAGAGCTGAGATTGCCAGAAGGTTTGAAAAGCATTGGTATAGGATTGGGACCAAATGGGGAACCCCTCAGAGATGTAGCAAGAAACCTACCTCAGAATACATCCACAAATAACTTGAGTCTTGGAAGTACAGGATCTGCAATAGGTGCTGGAGTTTTAGGTGCAGTTCCCACTGCTGGGGTGGGGTTGAATGGTCTTGGAGCAAGCCTGTCAGCAAATACTTTGGGAACCAATGCAGCTCTTAGCAACAGTCTAGGCTTACAGGCCTTAGGACTGACTGGTCTTGGTGCCTTACAAAATCAACTTCTTCAACAAGGTCTGACTGCAAATGATCTAGCCACAGTACTCACACAGGCCCAGGCTGCTAATGTTAACTCTAACAACCTATCTCTGGGTACCCCGGATATGGGTAGTGGTGTACTCGGAAATTCAGGCTTGGGCAATAACGTTCTGGGCGCAAATTCCTCTTTAAGTAGTGGGTCACTTTCAGGGACTAATCGTCAGATGGGCAGTGTGACAGTTCCAGGACAAGGGTATGGCCGTGATGGACAACAGGGGAGAGATAAACAATCAGATATTGTCATTATTACTAATCTTCCGCCAACAGTGACATGGCAACTAATAAGAGAGAAGTTCAGTGAGTGTGGTGATGTAAAGTATGCTGAGATGACAGCACCCGATACAGCTATAGTAAGATTCCATAAAGAGTGGGACGCCGAGAGAGCTCGGTATTTCGTTGTGGATAGTATGAATTCCTATAAGAAAGTAATGAAACGTTTCTACAAGGAAGTAATGGGTTGTGGCTATGGGGAAGAAATGGTATGTGGCTATGAGGGAGTATAA

Protein sequence:

>DPOGS204567-PA
MDSQREKERDRSRRGDRPSRFSDAPRDRSNDRDRSEGKRLFVSNIPYEFRWTELKDLFKEKVGDVAYVELFNDENGKPRGCGVVEFSNSEAMKKALFVMHRYELNGRKLVLKEETGNERNRLNSVRSGGGGGGRNMREDKDGWGVNKPREPENFNTYGLSLQFLESINVQPPLVKKVFVANLDYKADRAKIKEVFKMAGKVRNIDLAIDKDGNSRGFAVIEYDHPVEAVQAISMFDKQMLYERRMTVRMDRGVTDKSELRLPEGLKSIGIGLGPNGEPLRDVARNLPQNTSTNNLSLGSTGSAIGAGVLGAVPTAGVGLNGLGASLSANTLGTNAALSNSLGLQALGLTGLGALQNQLLQQGLTANDLATVLTQAQAANVNSNNLSLGTPDMGSGVLGNSGLGNNVLGANSSLSSGSLSGTNRQMGSVTVPGQGYGRDGQQGRDKQSDIVIITNLPPTVTWQLIREKFSECGDVKYAEMTAPDTAIVRFHKEWDAERARYFVVDSMNSYKKVMKRFYKEVMGCGYGEEMVCGYEGV-

Monarch geneset OGS2.0

Nucleotide sequence:

Protein sequence: