Monarch geneset OGS2.0

DPOGS204643
TranscriptDPOGS204643-TA1905 bp
ProteinDPOGS204643-PA634 aa
Genomic positionDPSCF300277 + 260867-265076
RNAseq coverage631x (Rank: top 20%)
Annotation
HeliconiusHMEL0094535e-9565.62% 
BombyxBGIBMGA009473-TA1e-7443.47% 
DrosophilaAIF-PB1e-11143.20% 
EBI UniRef50UniRef50_UPI000224671C2e-12244.59%UPI000224671C related cluster n=2 Tax=unknown RepID=UPI000224671C
NCBI RefSeqXP_395674.34e-13044.41%PREDICTED: similar to Programmed cell death protein 8, mitochondrial precursor (Apoptosis-inducing factor) isoform 1 [Apis mellifera]
NCBI nr blastpgi|3838619847e-13043.77%PREDICTED: apoptosis-inducing factor 1, mitochondrial-like [Megachile rotundata]
NCBI nr blastxgi|3287831132e-12345.36%PREDICTED: apoptosis-inducing factor 1, mitochondrial isoform 1 [Apis mellifera]
Group
Gene OntologyGO:00506604.8e-38flavin adenine dinucleotide binding
GO:00551144.8e-38oxidation-reduction process
GO:00164914.8e-38oxidoreductase activity
GO:00057371.3e-34cytoplasm
GO:00454541.3e-34cell redox homeostasis
KEGG pathwayaga:AgaP_AGAP0080445e-120 
 K04727 (PDCD8, AIF)maps-> Apoptosis
InterPro domain[511-628] IPR0161564.8e-38FAD/NAD-linked reductase, dimerisation
[514-632] IPR0040991.3e-34Pyridine nucleotide-disulphide oxidoreductase, dimerisation
[157-474] IPR0237537.8e-20Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
[156-175] IPR0130272.3e-08FAD-dependent pyridine nucleotide-disulphide oxidoreductase
Orthology groupMCL10895 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204643-TA
ATGTTAAGAGCAGTTGCAAGCATTTATGTCGAGGGTCAGACTCTTGTCCGGAGAGATGTATTTAAATTATTTCGAGCCTGTGCGTACTCAAGTTCGTCACCAGCTGAGCAGATAGTGTTGAGCAGTGATGCTATTAGGCATAGTCCCTCAGCCCGTACCAGATGTTCCTCGAGAGCTGACTTTGGAGGCACCGGGAGTGCAGGGGGCTCGGAGAAAAAAGGGAATACAGAATCCAGTTCTCCACCTCCACAACCATCTCCGAATCCTGGATCTCAGCGAGTCTGGTCGGCTTTAGCTGCTTTCGCCATCACTGTGTCACTAGGCGGAGCCTACCTTTATAAGAAACGTAATGATAATGAACTGGGTGAAGCACAGATTATCAATGACGGTCCAATAGAGAAGAAAAAGGAGAGAAAGAACATTGCTATTCCCCCAACCGCTGCGAGTCTTCCCACTCATGTGCAGTACTTGCTAGTGGGTGCCGGTACCGCCTCGTTCGCTGCCATGAGAGCCATCAGGAGCGCGCGGCCCGAAGCTCAGGTGCTTATGGTCGGAGAGGAGGCAGCCCTGCCATATATGCGACCGCCTCTCAGTAAGGAACTGTGGCGAGAGAAAGATCTACCCGCCCGCTTTGATCATCCCGACGATATATCCTTCCGTCAGTGGAACGGTCGGCGCCGAAGCCTGCTCTACGAGCCGAATGCATTTTACACGGCTGCCGACAAACTGAGCGAGGGCGAAGCGGGGGCGGGAGTCGCTCGCGGATGGAGAGTCATGAGCATCGACCCTTCAGCTCACAGCGCTGTGCTATCCAACCTCGACACTGATGAGAGCCACGTGTTGACGTACGACAAGTGTCTCATAGCTACAGGTGTTAGAGCAAGGCGGATTCCCGCCCTGCGAACAGCTGCAGCAGCTGGGAGGTCGTTGCAGCTGAGATCTGTTCACGATACAGCCCGCCTCGCTGCCGCAGTGGATGATCCGGGTGTCAAGGATGTAGCGGTCGTGGGCGGTGGATTCCTAGCTTCAGAGCTCAGCGCCGCCCTCGCTGATAGACTTCGTCCCGAAGGTAAGCGTGTTATGCAAGTGTTCCGGGAGAGCGCTCCGCTAGAGGGCGTGTTGCCGCACTACCTGGCTGCTGAGGCGGCGCGCAGACTGGAAGAGGCGGGCGTCACACTGGTGCCTAGTGAGGAAGTGGTGGACAGTGCTGTGGACGAGTCGGGTCGTGTGTCATTGCGGTTGTCGTCCGGCGCTACACTGGGAGCGAACGTCGTAGCAGAATGCGCGGGCAGCGAGCCCGCTACGGAGCTAGCCGTAGCATCGGGCCTGGAGCTGCACCCTGAGTTGGGCGGTGTCCTCGTAGACGCCGAGCTACGAGCTCGATCGGACTTGTTCGCGGCCGGCGACGTAGCCTGCTTCTACGATGTAGCTCTCGGACGTAGGCGCGTAGAGCATCACGATCACGCGGTGGTGTCGGGTCGCCTGGCCGGGGAGAACATGGCCGGCGTGAAGCCTCCACAACACTACAAGCACCAGAGCATGTTCTGGAGCGACCTCGGACCACAGCTGGGATATGAGGCGATAGGTATAATAGATTCCGAGCTGCGCACGGTGGGCGTGTTCTCGGCAGACGCGGTCAAGGAACAGTCGTCCGAGTCGAGATCCTTAGGGGCGGCGGACGCGGCCGACGACAAGGTGGAGAGTGGGGAGGGGGCGAAGCCCGAGTCGGCGCCGAAGAGATACGACCGCGGCGTCGTGTTCTATCTGAGAGAGAAGCGTGTAGTCGGTGTACTCCTGTGGAACCTATTCAACCGCTTGCATGTCGCTAGACAGGTCCTGGCGCAGGGCGAGTTCGATGACCTCTTCGAAGTGGCGAAGCTCTTCACTCTTAACGACGAGGAGTAG

Protein sequence:

>DPOGS204643-PA
MLRAVASIYVEGQTLVRRDVFKLFRACAYSSSSPAEQIVLSSDAIRHSPSARTRCSSRADFGGTGSAGGSEKKGNTESSSPPPQPSPNPGSQRVWSALAAFAITVSLGGAYLYKKRNDNELGEAQIINDGPIEKKKERKNIAIPPTAASLPTHVQYLLVGAGTASFAAMRAIRSARPEAQVLMVGEEAALPYMRPPLSKELWREKDLPARFDHPDDISFRQWNGRRRSLLYEPNAFYTAADKLSEGEAGAGVARGWRVMSIDPSAHSAVLSNLDTDESHVLTYDKCLIATGVRARRIPALRTAAAAGRSLQLRSVHDTARLAAAVDDPGVKDVAVVGGGFLASELSAALADRLRPEGKRVMQVFRESAPLEGVLPHYLAAEAARRLEEAGVTLVPSEEVVDSAVDESGRVSLRLSSGATLGANVVAECAGSEPATELAVASGLELHPELGGVLVDAELRARSDLFAAGDVACFYDVALGRRRVEHHDHAVVSGRLAGENMAGVKPPQHYKHQSMFWSDLGPQLGYEAIGIIDSELRTVGVFSADAVKEQSSESRSLGAADAADDKVESGEGAKPESAPKRYDRGVVFYLREKRVVGVLLWNLFNRLHVARQVLAQGEFDDLFEVAKLFTLNDEE-