| DPOGS204711 | ||
|---|---|---|
| Transcript | DPOGS204711-TA | 519 bp |
| Protein | DPOGS204711-PA | 172 aa |
| Genomic position | DPSCF300257 - 197448-199251 | |
| RNAseq coverage | 23x (Rank: top 78%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002604 | 2e-15 | 33.61% | |
| Bombyx | BGIBMGA008263-TA | 1e-19 | 35.22% | |
| Drosophila | CG5245-PA | 4e-13 | 34.01% | |
| EBI UniRef50 | UniRef50_C1BFA8 | 1e-15 | 40.17% | Gastrula zinc finger protein XLCGF57.1 n=2 Tax=Oncorhynchus mykiss RepID=C1BFA8_ONCMY |
| NCBI RefSeq | XP_001807712.1 | 6e-16 | 37.04% | PREDICTED: similar to zinc finger protein 160 [Tribolium castaneum] |
| NCBI nr blastp | gi|149642393 | 8e-16 | 37.42% | PREDICTED: zinc finger protein 236 [Ornithorhynchus anatinus] |
| NCBI nr blastx | gi|149642393 | 3e-18 | 36.77% | PREDICTED: zinc finger protein 236 [Ornithorhynchus anatinus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003676 | 5.6e-09 | nucleic acid binding | |
| GO:0008270 | 1.7e-05 | zinc ion binding | ||
| GO:0005622 | 1.7e-05 | intracellular | ||
| KEGG pathway | ||||
| InterPro domain | [82-106] IPR013087 | 5.6e-09 | Zinc finger, C2H2-type/integrase, DNA-binding | |
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204711-TA
ATGCATCTGAATGTGGAGGCTCCTGAAGATCGTAAGACAGAATGCAATAATGACACTACACAAGCTAGTGATGTTGAAGTCAAGCAGATGAGGGATACACGTGATGAAGATGTTAATAAAGATTCAGACTTCTCCTGCCAGTTCTGCTCCAAAGTATTTACTCGGAAGTTTAATCTGAAGTTGCATGAACTGCGGCACGTGTCCTGTTCCTATCCCGGCAGTGCTCGCCCCCGGCCCGCCCGCTCCTGTCCGTTGTGTCCAAAGTCCTACACCAGCTACACAAACCTCAAGGATCACATGAGAACACACACCGGTGAGAGACCGTTTGTGTGCTCCGACTGTGGGAAAGCTTTTGGAAGTAAAAAGATATTGAATGGCACGGCCCGCGCGGAGCACGCGTGCTCGCTGTGTCCCGCGCGGTACAACCACAAGCAGTCGCTCAACAAACACATACGGAAGGTTCACGGCCTGAATCCTTCGCAGGTGTGTGAGAGGAACGAGGGTGTCGGGTTCACTTGA
>DPOGS204711-PA
MHLNVEAPEDRKTECNNDTTQASDVEVKQMRDTRDEDVNKDSDFSCQFCSKVFTRKFNLKLHELRHVSCSYPGSARPRPARSCPLCPKSYTSYTNLKDHMRTHTGERPFVCSDCGKAFGSKKILNGTARAEHACSLCPARYNHKQSLNKHIRKVHGLNPSQVCERNEGVGFT-