| DPOGS204750 | ||
|---|---|---|
| Transcript | DPOGS204750-TA | 651 bp |
| Protein | DPOGS204750-PA | 216 aa |
| Genomic position | DPSCF300231 - 350757-359225 | |
| RNAseq coverage | 126x (Rank: top 57%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010453 | 2e-24 | 66.34% | |
| Bombyx | BGIBMGA000838-TA | 1e-87 | 77.06% | |
| Drosophila | fd3F-PB | 7e-35 | 78.95% | |
| EBI UniRef50 | UniRef50_F4X865 | 8e-35 | 58.27% | Forkhead transcription factor HCM1 n=2 Tax=Myrmicinae RepID=F4X865_ACREC |
| NCBI RefSeq | XP_001603298.1 | 8e-35 | 40.95% | PREDICTED: similar to forkhead box protein (AaegFOXM1) [Nasonia vitripennis] |
| NCBI nr blastp | gi|332016286 | 3e-34 | 58.27% | Forkhead transcription factor HCM1 [Acromyrmex echinatior] |
| NCBI nr blastx | gi|307166224 | 4e-33 | 54.30% | Forkhead transcription factor HCM1 [Camponotus floridanus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006355 | 2e-26 | regulation of transcription, DNA-dependent | |
| GO:0043565 | 2e-26 | sequence-specific DNA binding | ||
| GO:0003700 | 2e-26 | sequence-specific DNA binding transcription factor activity | ||
| KEGG pathway | ||||
| InterPro domain | [66-151] IPR001766 | 2e-26 | Transcription factor, fork head | |
| [62-148] IPR011991 | 3.9e-25 | Winged helix-turn-helix transcription repressor DNA-binding | ||
| Orthology group | MCL26572 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204750-TA
ATGGCAAGCAAAACGGTAAGCGATAAAGCAAAATGGCGCAGAAGAAAATTTCCTAAAACTGTCGATGAAGATAACGACTGCGCGAGTCTTGCTTGGCTTCTGAACTTTCGTTTGGATGAATTTGTAAACGTCAAGGTGCCAGATGACGAGCCCGTGGAAGCGCTGAGAGAAGTCATAGAAGATTCACCACCAGCGGCCAAGAAACCTCCATATACATATCCCGAGCTGATAGAAAGAGCTTTGCGAGAAAAGGGTGAATTGACCGTGTCTGCTATTTATCAATGGATTTCGGATCGATTTCCGTTCTATAAGGCGAACGATGAGCGCTGGAAGAACTCCGTGAGGCACAATTTATCTATCAATCCACATTTCCGTAAGGGTGCCAGGGCGTCCCAGGGCGCCGGTCACCTCTGGTCTCTTGCAGCTAATGCAATAGATCTACTACCGTTACGAAACCAGACATATGAAAAGACTGACGTCCAAGAAACCCAAATAATTGAATGTCCCAAGGTAATAGTTTTGGATGAGGCCGCAATAGCCGCAGCGAGCATAATGCCGGATCAGGACTTATTCACCGGCGGTACAATGTTCCTAAATCCTGTTTCTACGGAACAAGTGGTACGTGAATGTGGTCTCATCACAGGACTTTGA
>DPOGS204750-PA
MASKTVSDKAKWRRRKFPKTVDEDNDCASLAWLLNFRLDEFVNVKVPDDEPVEALREVIEDSPPAAKKPPYTYPELIERALREKGELTVSAIYQWISDRFPFYKANDERWKNSVRHNLSINPHFRKGARASQGAGHLWSLAANAIDLLPLRNQTYEKTDVQETQIIECPKVIVLDEAAIAAASIMPDQDLFTGGTMFLNPVSTEQVVRECGLITGL-