Monarch geneset OGS2.0

DPOGS204797
TranscriptDPOGS204797-TA624 bp
ProteinDPOGS204797-PA207 aa
Genomic positionDPSCF300460 - 92925-93805
RNAseq coverage246x (Rank: top 42%)
Annotation
HeliconiusHMEL0131833e-9985.22% 
BombyxBGIBMGA010827-TA9e-9382.74% 
DrosophilaCsl4-PA2e-4248.65% 
EBI UniRef50UniRef50_E2A2742e-5660.00%3'-5' exoribonuclease CSL4-like protein n=11 Tax=Coelomata RepID=E2A274_CAMFO
NCBI RefSeqXP_624453.12e-5759.46%PREDICTED: similar to Csl4 CG6249-PA [Apis mellifera]
NCBI nr blastpgi|3320184592e-5658.92%3'-5' exoribonuclease CSL4-like protein [Acromyrmex echinatior]
NCBI nr blastxgi|3504240341e-5558.92%PREDICTED: exosome complex component CSL4-like [Bombus impatiens]
Group
KEGG pathwayame:5520727e-57 
 K07573 (CSL4, EXOSC1)maps-> RNA degradation
InterPro domain[55-124] IPR0194958e-22Exosome complex, component CSL4
Orthology groupMCL13987 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204797-TA
ATGAGGTTAAGTTCATCAGACAAAGGTCATTTAGCCGGACCGGGAACTTATGAATTAAAAGGTTATATCTATTCAATGTTGACTGGAGTGTTAAAAACCGAAGAAGATGAAGAAAGGAAGGCGACAAGAATATGTGTAGTTAGTCCAAGGACACCAAGTGTACTGCCAGTAACAGGGGATATTGTCACAGCTAAAGTAACTGTAGTTAATTCAAGACAAGTGAATTGTATCATTCTCTGTGTAGGTCCATCTCCTCTGGTCAGGCCTTATAGAGGAATCCTCAAAAAGGAAGATATAAAATTCACAGATAAAGATAGAATAGATCCATATAAATGTTTCAGACCAGGCGACATTATATTGGCAAGAGTTTTGCCCATGACTGAAATACATTGGTATCATCTGTCTACTGCGGAAAATGAACTTGGAGTGGTGATTGCAACTGCCGAGGGTTCACCTCAAGGAATAAGTATGGTGCCTATAAGCTGGTCTGAAATGCAATGTCCGAAAACTCTTGCTAAAGAACCTAGAAAAGTGGCCAGAGTTATACCGGAAAATATAAACCAAGCTCTATTTCCAGTGGATTCTAAGGAACCACAGAAAGAAAATGGCATTGGAAATAAATAG

Protein sequence:

>DPOGS204797-PA
MRLSSSDKGHLAGPGTYELKGYIYSMLTGVLKTEEDEERKATRICVVSPRTPSVLPVTGDIVTAKVTVVNSRQVNCIILCVGPSPLVRPYRGILKKEDIKFTDKDRIDPYKCFRPGDIILARVLPMTEIHWYHLSTAENELGVVIATAEGSPQGISMVPISWSEMQCPKTLAKEPRKVARVIPENINQALFPVDSKEPQKENGIGNK-