Monarch geneset OGS2.0

DPOGS204801
TranscriptDPOGS204801-TA645 bp
ProteinDPOGS204801-PA214 aa
Genomic positionDPSCF300460 + 78561-80481
RNAseq coverage318x (Rank: top 36%)
Annotation
HeliconiusHMEL0131812e-6577.98% 
BombyxBGIBMGA010724-TA3e-4685.38% 
Drosophilavps24-PA1e-8069.06% 
EBI UniRef50UniRef50_G5AQ112e-6764.44%Charged multivesicular body protein 3 n=26 Tax=Coelomata RepID=G5AQ11_HETGA
NCBI RefSeqXP_968988.13e-8673.52%PREDICTED: similar to neuroendocrine differentiation factor [Tribolium castaneum]
NCBI nr blastpgi|3123743572e-8574.09%hypothetical protein AND_16013 [Anopheles darlingi]
NCBI nr blastxgi|910898152e-8673.97%PREDICTED: similar to neuroendocrine differentiation factor [Tribolium castaneum]
Group
Gene OntologyGO:00150311.3e-40protein transport
KEGG pathwaytca:6574348e-86 
 K12193 (VPS24, CHMP3)maps-> Endocytosis
InterPro domain[18-187] IPR0050241.3e-40Snf7
Orthology groupMCL13980 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204801-TA
ATGGGTTTATTTGGTAAATCACCGGAAAGAAATCCCAAGGAAATGGTAAATGAATGGTCTCACAAAATTCGAAAAGAAGGATATAATTTGGACAGACAAATAAGAGCCATTCAAAGGGAAGAGGAAAAAGTTAAAAGATCCCTTAAAGAAGCAGCAACCAAAAACGACAAACAAGTATGCACAATACTAGCAAAAGAAATCATAAGATCAAGAAAAACTATCAGCAAAATATACACAAGCAAAGCACATCTTAATTCTGTACAGATGCAAATGAAAAATCAACTCGCAACTTTAAGGGTGGCTGGGTCATTACAAAAATCCACGGAGGTGATGCAAGCAATGCAAGCGCTTGTCCGTTTACCCGAAATCGCAAATACCATGCAGGAATTGAGTAAGGAGATGATGAAGGCCGGCATTATTGAGGAGATGTTGGATGATACCATGTCCAACCTGGAGGATGAAGAGGAGATGGAAGAGGCAGCGCAGAGTGAGGTGGATAAGGTTTTGTGGGAGTTAACTCAAGGCAAGTTGGGGGAAGCCCCGGCGCCGCCGACAGCAGAGGCGCCCTCTACCAGCAAGGAGCCCGAGGAGGATGAAACGGAACTGGATGAAATGCAATCCAGACTCGAGGCTCTCAGATCATAG

Protein sequence:

>DPOGS204801-PA
MGLFGKSPERNPKEMVNEWSHKIRKEGYNLDRQIRAIQREEEKVKRSLKEAATKNDKQVCTILAKEIIRSRKTISKIYTSKAHLNSVQMQMKNQLATLRVAGSLQKSTEVMQAMQALVRLPEIANTMQELSKEMMKAGIIEEMLDDTMSNLEDEEEMEEAAQSEVDKVLWELTQGKLGEAPAPPTAEAPSTSKEPEEDETELDEMQSRLEALRS-