| DPOGS204845 | ||
|---|---|---|
| Transcript | DPOGS204845-TA | 150 bp |
| Protein | DPOGS204845-PA | 49 aa |
| Genomic position | DPSCF300227 - 78903-79052 | |
| RNAseq coverage | 5457x (Rank: top 2%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006331 | 8e-26 | 95.92% | |
| Bombyx | BGIBMGA011737-TA | 1e-24 | 93.88% | |
| Drosophila | TfIIA-L-PA | 6e-25 | 89.80% | |
| EBI UniRef50 | UniRef50_E2AFV2 | 2e-23 | 95.92% | Transcription initiation factor IIA subunit 1 n=3 Tax=Formicidae RepID=E2AFV2_CAMFO |
| NCBI RefSeq | XP_395730.2 | 1e-23 | 93.88% | PREDICTED: similar to Transcription factor IIA L CG5930-PA, isoform A [Apis mellifera] |
| NCBI nr blastp | gi|332022952 | 6e-23 | 95.92% | Transcription initiation factor IIA subunit 1 [Acromyrmex echinatior] |
| NCBI nr blastx | gi|332022952 | 2e-21 | 95.92% | Transcription initiation factor IIA subunit 1 [Acromyrmex echinatior] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005672 | 1.3e-52 | transcription factor TFIIA complex | |
| GO:0006367 | 1.3e-52 | transcription initiation from RNA polymerase II promoter | ||
| KEGG pathway | ame:412268 | 3e-23 | ||
| K03122 (TFIIA1) | maps-> | Basal transcription factors | ||
| InterPro domain | [1-49] IPR004855 | 1.3e-52 | Transcription factor IIA, alpha/beta subunit | |
| [2-49] IPR009088 | 1.7e-27 | Transcription factor IIA, beta-barrel | ||
| Orthology group | MCL15595 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204845-TA
ATGTTCGACACTGACAATGTAGTGGTTTGTCAATACGATAAAATCACACGCAGCCGTAACAAGTGGAAGTTCCATTTAAAAGATGGTATAATGAATTTATCGGGTAAAGATTATGTCTTTCAAAAAGCCAACGGTGATGCGGAATGGTGA
>DPOGS204845-PA
MFDTDNVVVCQYDKITRSRNKWKFHLKDGIMNLSGKDYVFQKANGDAEW-