DPOGS204886 | ||
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Transcript | DPOGS204886-TA | 615 bp |
Protein | DPOGS204886-PA | 204 aa |
Genomic position | DPSCF300307 + 32575-33395 | |
RNAseq coverage | 300x (Rank: top 37%) |
Annotation | ||||
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Heliconius | HMEL006312 | 4e-91 | 72.55% |   |
Bombyx | BGIBMGA011711-TA | 6e-87 | 72.54% |   |
Drosophila | CG16940-PC | 2e-27 | 44.62% |   |
EBI UniRef50 | UniRef50_D6WW44 | 9e-47 | 45.79% | Putative uncharacterized protein n=3 Tax=Tribolium castaneum RepID=D6WW44_TRICA |
NCBI RefSeq | XP_969131.1 | 7e-47 | 46.51% | PREDICTED: similar to exosome complex exonuclease RRP44 [Tribolium castaneum] |
NCBI nr blastp | gi|270012215 | 3e-46 | 45.79% | hypothetical protein TcasGA2_TC006328 [Tribolium castaneum] |
NCBI nr blastx | gi|270012215 | 3e-44 | 45.79% | hypothetical protein TcasGA2_TC006328 [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0003723 | 6.2e-16 | RNA binding | |
GO:0004540 | 6.2e-16 | ribonuclease activity | ||
KEGG pathway | hmg:100211666 | 1e-28 |   | |
  | K12585 (DIS3, RRP44) | maps-> | RNA degradation | |
InterPro domain | [2-60] IPR001900 | 6.2e-16 | Ribonuclease II/R | |
Orthology group | MCL11696 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204886-TA
ATGGTTCTTAGCATGTTGTGCACGAAACCGATGACGAGAGCAAAGTATTTTTGTGCAGCCTCATGCGTGGATGACGATTTCCATCACTATGCTCTTAATGTTCCATTGTATACTCACTTCACTAGTCCAATACGGCGCTACGCAGATATCATGGTTCATAGGCTGTTATCAGCAAGCCTTAACTACAGCAAAGTTCCTGCTTGGGAAGTTGATAAGGTCAGAATGGTGGCTGCCAATTGTAACAAACAGAAGTACAATGCTAAGAGAGCCGGTGAAATGTCCACTGAGCTTTACACTTTGAAGTACATAGAAATTAACTCGCCAGTTACAGCAGAAGCCGTTGTTGTTGATGTCAAGGAAAAATATATTGATGTTATAATAACGGCGATGGGTTTAAATCGACGCATTTTCTTCAATAACGATTTCCCAGGTGAATTCCTTTGTGTTAAAAACGATGCAGGCGTAAGACTTTCCAAAATGGAGTTGACGTGGAACGAAACAGACACTCTGCCTTCCGTTAAACAAGTTATTGAAGTATTTTCCTTACTACAAGTAGAATTGTACAAAGGGGATGACATGTTGAAAGTAGAGACGAAGCTTGTAAGGCCGAAATGA
>DPOGS204886-PA
MVLSMLCTKPMTRAKYFCAASCVDDDFHHYALNVPLYTHFTSPIRRYADIMVHRLLSASLNYSKVPAWEVDKVRMVAANCNKQKYNAKRAGEMSTELYTLKYIEINSPVTAEAVVVDVKEKYIDVIITAMGLNRRIFFNNDFPGEFLCVKNDAGVRLSKMELTWNETDTLPSVKQVIEVFSLLQVELYKGDDMLKVETKLVRPK-