DPOGS204887 | ||
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Transcript | DPOGS204887-TA | 513 bp |
Protein | DPOGS204887-PA | 170 aa |
Genomic position | DPSCF300307 + 38793-40192 | |
RNAseq coverage | 72x (Rank: top 66%) |
Annotation | ||||
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Heliconius | HMEL009956 | 9e-54 | 55.29% |   |
Bombyx | BGIBMGA011711-TA | 7e-12 | 40.00% |   |
Drosophila | Fancl-PA | 3e-07 | 26.22% |   |
EBI UniRef50 | UniRef50_F5HPV0 | 5e-34 | 47.48% | Fanconi anemia, complementation group L n=1 Tax=Bombyx mori RepID=F5HPV0_BOMMO |
NCBI RefSeq | XP_002424186.1 | 1e-11 | 32.54% | ubiquitin ligase protein FANCL, putative [Pediculus humanus corporis] |
NCBI nr blastp | gi|350536763 | 2e-33 | 47.48% | Fanconi anemia, complementation group L [Bombyx mori] |
NCBI nr blastx | gi|350536763 | 4e-35 | 50.38% | Fanconi anemia, complementation group L [Bombyx mori] |
Group | ||||
---|---|---|---|---|
KEGG pathway | phu:Phum_PHUM117540 | 3e-11 |   | |
  | K10606 (FANCL, PHF9) | maps-> | Ubiquitin mediated proteolysis | |
Orthology group | MCL17964 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204887-TA
ATGTGTAATGTCAGGGAGCCTGTTAAGCCAACATTCAAAGACGACTATAGGAGAATTTTAGTGGATAATAAAACATGGCTGCATATAGAAGTAAGTTTTGATGGCAGGCCAAGAAACGTGCACATCATTGGAAACTCTGAAATAGGACAAAATAAAACTAAAAATTTTTTGTTAAATTGGGATCATGACAAGAATATTGTTGAAAATATACATTCTTTATTTGGAGAACTCACTAAGAATGGTGATAACTGGGACACAGAACTTATAGAAGTAAAAGAAGATGAAGAGGTGACGTCCTGTTGTATATGTTTTTGTGTTGAACTACCAGATTGTCCTGGAATACCTCAACCAATGTGTCAAAATTCAAAGTGTGGAGCCTATTATCACAGAAGTTGCTTGTTTCAGTGGCTAGTTGCTTGTGATGGTGGTCGTATTCCTGCATTTGGTGTTGCAAGTGGCAATTGTCCTTCATGCTTTCAACAAACAACTTGCCATGAAAAGGATAATTACTAA
>DPOGS204887-PA
MCNVREPVKPTFKDDYRRILVDNKTWLHIEVSFDGRPRNVHIIGNSEIGQNKTKNFLLNWDHDKNIVENIHSLFGELTKNGDNWDTELIEVKEDEEVTSCCICFCVELPDCPGIPQPMCQNSKCGAYYHRSCLFQWLVACDGGRIPAFGVASGNCPSCFQQTTCHEKDNY-