| DPOGS204910 | ||
|---|---|---|
| Transcript | DPOGS204910-TA | 678 bp |
| Protein | DPOGS204910-PA | 225 aa |
| Genomic position | DPSCF300340 - 61071-64880 | |
| RNAseq coverage | 1x (Rank: top 93%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010826 | 3e-26 | 60.00% | |
| Bombyx | BGIBMGA001697-TA | 1e-11 | 47.83% | |
| Drosophila | CCS-PB | 2e-10 | 38.71% | |
| EBI UniRef50 | UniRef50_E2BK27 | 7e-18 | 53.19% | Copper chaperone for superoxide dismutase n=4 Tax=Coelomata RepID=E2BK27_HARSA |
| NCBI RefSeq | XP_625006.2 | 3e-20 | 40.15% | PREDICTED: similar to Copper chaperone for superoxide dismutase (Superoxide dismutase copper chaperone), partial [Apis mellifera] |
| NCBI nr blastp | gi|383857162 | 3e-21 | 46.21% | PREDICTED: copper chaperone for superoxide dismutase-like [Megachile rotundata] |
| NCBI nr blastx | gi|383857162 | 2e-20 | 46.21% | PREDICTED: copper chaperone for superoxide dismutase-like [Megachile rotundata] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0004784 | 5.3e-21 | superoxide dismutase activity | |
| GO:0055114 | 5.3e-21 | oxidation-reduction process | ||
| GO:0006801 | 4.2e-11 | superoxide metabolic process | ||
| GO:0046872 | 4.2e-11 | metal ion binding | ||
| KEGG pathway | ame:552629 | 9e-20 | ||
| K04569 (CCS) | maps-> | Amyotrophic lateral sclerosis (ALS) | ||
| InterPro domain | [21-132] IPR024142 | 5.3e-21 | Superoxide dismutase copper chaperone | |
| [21-132] IPR024134 | 5.3e-21 | Superoxide dismutase (Cu/Zn) / chaperones | ||
| [80-145] IPR001424 | 4.2e-11 | Superoxide dismutase, copper/zinc binding domain | ||
| Orthology group | MCL22616 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204910-TA
ATGATACCATCTAAGCTGGAAGTGCTCGTTGACTTTGGGCCGACCCCAGACAAAGTGACCGTTGAAAAGACTCTCAACTACCTGAACGCCCAAGACGATGTTCAGCAGGCAGTATTTAAGAATGGAGCAGTCATGGTAGAGACGGTGTTACCGAGTTCCGTCGTCTTGGATATGGTGATTAAGACATCGGGGAAGAGGGCTGTTCTTCAAGGATATGGGGACAGTACGTCAGCCGTAGCTATGGTCTCGAGCAAGTGCACCACGGAGCAAGTGCTCGGCGTCATACGCTTCACTCAGACGGACAGCGTCTTGATAGCTGACGGTAGTGTGGACGGACTGACTCCAGGCTTACACGGACTACACGTGCACGAGAGTGGGGATTTGAGCATGGAAATGGGTTTTACGAAGACAAATCAACAATCACGTCAGAGCGACAAAGCAACGCCATCTTTTGGTAGACTCCAGGAACAATCTAGAATACTGTCTCGAAGGAAATGGTACCATACAGACGAGGTTTACGATGAGGACATGATAAACGAGGCGCTGCTCGGACAAGCGGAAGTCATTAAGGGGAAAGCTATTGGTGTAAATTTCATGAAATTTCAAAAACCGCCTCCACCTTTGGATCACTTGAAGCATTCAGAAGTCTTCAAAGCTATCCACGAGCAAGAACATTAA
>DPOGS204910-PA
MIPSKLEVLVDFGPTPDKVTVEKTLNYLNAQDDVQQAVFKNGAVMVETVLPSSVVLDMVIKTSGKRAVLQGYGDSTSAVAMVSSKCTTEQVLGVIRFTQTDSVLIADGSVDGLTPGLHGLHVHESGDLSMEMGFTKTNQQSRQSDKATPSFGRLQEQSRILSRRKWYHTDEVYDEDMINEALLGQAEVIKGKAIGVNFMKFQKPPPPLDHLKHSEVFKAIHEQEH-