DPOGS204910 | ||
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Transcript | DPOGS204910-TA | 678 bp |
Protein | DPOGS204910-PA | 225 aa |
Genomic position | DPSCF300340 - 61071-64880 | |
RNAseq coverage | 1x (Rank: top 93%) |
Annotation | ||||
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Heliconius | HMEL010826 | 3e-26 | 60.00% |   |
Bombyx | BGIBMGA001697-TA | 1e-11 | 47.83% |   |
Drosophila | CCS-PB | 2e-10 | 38.71% |   |
EBI UniRef50 | UniRef50_E2BK27 | 7e-18 | 53.19% | Copper chaperone for superoxide dismutase n=4 Tax=Coelomata RepID=E2BK27_HARSA |
NCBI RefSeq | XP_625006.2 | 3e-20 | 40.15% | PREDICTED: similar to Copper chaperone for superoxide dismutase (Superoxide dismutase copper chaperone), partial [Apis mellifera] |
NCBI nr blastp | gi|383857162 | 3e-21 | 46.21% | PREDICTED: copper chaperone for superoxide dismutase-like [Megachile rotundata] |
NCBI nr blastx | gi|383857162 | 2e-20 | 46.21% | PREDICTED: copper chaperone for superoxide dismutase-like [Megachile rotundata] |
Group | ||||
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Gene Ontology | GO:0004784 | 5.3e-21 | superoxide dismutase activity | |
GO:0055114 | 5.3e-21 | oxidation-reduction process | ||
GO:0006801 | 4.2e-11 | superoxide metabolic process | ||
GO:0046872 | 4.2e-11 | metal ion binding | ||
KEGG pathway | ame:552629 | 9e-20 |   | |
  | K04569 (CCS) | maps-> | Amyotrophic lateral sclerosis (ALS) | |
InterPro domain | [21-132] IPR024142 | 5.3e-21 | Superoxide dismutase copper chaperone | |
[21-132] IPR024134 | 5.3e-21 | Superoxide dismutase (Cu/Zn) / chaperones | ||
[80-145] IPR001424 | 4.2e-11 | Superoxide dismutase, copper/zinc binding domain | ||
Orthology group | MCL22616 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204910-TA
ATGATACCATCTAAGCTGGAAGTGCTCGTTGACTTTGGGCCGACCCCAGACAAAGTGACCGTTGAAAAGACTCTCAACTACCTGAACGCCCAAGACGATGTTCAGCAGGCAGTATTTAAGAATGGAGCAGTCATGGTAGAGACGGTGTTACCGAGTTCCGTCGTCTTGGATATGGTGATTAAGACATCGGGGAAGAGGGCTGTTCTTCAAGGATATGGGGACAGTACGTCAGCCGTAGCTATGGTCTCGAGCAAGTGCACCACGGAGCAAGTGCTCGGCGTCATACGCTTCACTCAGACGGACAGCGTCTTGATAGCTGACGGTAGTGTGGACGGACTGACTCCAGGCTTACACGGACTACACGTGCACGAGAGTGGGGATTTGAGCATGGAAATGGGTTTTACGAAGACAAATCAACAATCACGTCAGAGCGACAAAGCAACGCCATCTTTTGGTAGACTCCAGGAACAATCTAGAATACTGTCTCGAAGGAAATGGTACCATACAGACGAGGTTTACGATGAGGACATGATAAACGAGGCGCTGCTCGGACAAGCGGAAGTCATTAAGGGGAAAGCTATTGGTGTAAATTTCATGAAATTTCAAAAACCGCCTCCACCTTTGGATCACTTGAAGCATTCAGAAGTCTTCAAAGCTATCCACGAGCAAGAACATTAA
>DPOGS204910-PA
MIPSKLEVLVDFGPTPDKVTVEKTLNYLNAQDDVQQAVFKNGAVMVETVLPSSVVLDMVIKTSGKRAVLQGYGDSTSAVAMVSSKCTTEQVLGVIRFTQTDSVLIADGSVDGLTPGLHGLHVHESGDLSMEMGFTKTNQQSRQSDKATPSFGRLQEQSRILSRRKWYHTDEVYDEDMINEALLGQAEVIKGKAIGVNFMKFQKPPPPLDHLKHSEVFKAIHEQEH-