| DPOGS204934 | ||
|---|---|---|
| Transcript | DPOGS204934-TA | 405 bp |
| Protein | DPOGS204934-PA | 134 aa |
| Genomic position | DPSCF300160 - 338945-340368 | |
| RNAseq coverage | 6601x (Rank: top 2%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002550 | 2e-43 | 72.41% | |
| Bombyx | BGIBMGA005277-TA | 8e-35 | 56.03% | |
| Drosophila | Cpr67Fb-PA | 7e-21 | 41.80% | |
| EBI UniRef50 | UniRef50_O02387 | 6e-33 | 53.90% | Larval cuticle protein LCP-17 n=5 Tax=Endopterygota RepID=CU17_BOMMO |
| NCBI RefSeq | NP_001036827.1 | 9e-34 | 53.90% | larval cuticle protein LCP-17 precursor [Bombyx mori] |
| NCBI nr blastp | gi|183979278 | 2e-42 | 65.93% | cuticular protein CPR2 [Papilio xuthus] |
| NCBI nr blastx | gi|183979278 | 1e-42 | 65.93% | cuticular protein CPR2 [Papilio xuthus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0042302 | 1.5e-14 | structural constituent of cuticle | |
| KEGG pathway | ||||
| InterPro domain | [41-96] IPR000618 | 1.5e-14 | Insect cuticle protein | |
| Orthology group | MCL25121 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204934-TA
ATGAAATTCCTAGTCCTTCTCGCCGTTGTGGCTTACGTCTCCGCTGAGGGCGTCAAATACGACGAATCCGCAGCCAGCATCGTCAAATCCTCCTTCGACAGCAGCCCTGAAGGAAACTCTTTCAGCTACGGCTTCGAAAGCAACAACGGCATCATTTCTCAAGCTGAGGGTGTTGTGAAGAACCCCAGCGGTGAGAACCCCGCTCTTGAAGTCAAGGGATCAGTCAAGTACAACGCTCCCGATGGAACTCCCGTTGAATTGGTGTACGTAGCAAACGAAAACGGATACCAGGCCTCTGGCTCCCACATCCCCGTGCCACCCCCAATCCCAGAGCTGATCCTCCGCAGTCTCCAATACATCGCTGAACACCCCGCCCCCGTTGAGCGTGTAGTCAAGAAGAACTAA
>DPOGS204934-PA
MKFLVLLAVVAYVSAEGVKYDESAASIVKSSFDSSPEGNSFSYGFESNNGIISQAEGVVKNPSGENPALEVKGSVKYNAPDGTPVELVYVANENGYQASGSHIPVPPPIPELILRSLQYIAEHPAPVERVVKKN-