DPOGS204965 | ||
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Transcript | DPOGS204965-TA | 600 bp |
Protein | DPOGS204965-PA | 199 aa |
Genomic position | DPSCF300160 + 641101-647537 | |
RNAseq coverage | 2x (Rank: top 91%) |
Annotation | ||||
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Heliconius | HMEL003744 | 5e-52 | 59.67% |   |
Bombyx | BGIBMGA011098-TA | 8e-76 | 73.40% |   |
Drosophila | bsh-PB | 1e-36 | 61.07% |   |
EBI UniRef50 | UniRef50_D2A4M9 | 1e-49 | 57.71% | Brain-specific homeobox n=2 Tax=Endopterygota RepID=D2A4M9_TRICA |
NCBI RefSeq | XP_320094.4 | 7e-39 | 65.38% | AGAP009302-PA [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|270009276 | 4e-49 | 57.71% | brain-specific homeobox [Tribolium castaneum] |
NCBI nr blastx | gi|270009276 | 1e-47 | 57.29% | brain-specific homeobox [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0006355 | 2.4e-26 | regulation of transcription, DNA-dependent | |
GO:0043565 | 2.4e-26 | sequence-specific DNA binding | ||
GO:0003700 | 2.4e-26 | sequence-specific DNA binding transcription factor activity | ||
GO:0005515 | 2.4e-24 | protein binding | ||
GO:0003677 | 3.3e-24 | DNA binding | ||
KEGG pathway |   | |||
InterPro domain | [124-186] IPR001356 | 2.4e-26 | Homeobox | |
[115-193] IPR009057 | 2.4e-24 | Homeodomain-like | ||
[117-183] IPR012287 | 3.3e-24 | Homeodomain-related | ||
[146-157] IPR020479 | 1.1e-07 | Homeobox, eukaryotic | ||
Orthology group | MCL16554 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204965-TA
ATGAATCAGGACATACGAAGCGACTCCCCTAACAAGGAGCAGAAGACCTCGTTCCTCATAGAGGACATCCTGTACAGAGGGAGGAACACCTTCAAACAGCCGGAATCGCGGAGATTTGATTACGAGCCGAAGTATTATCCGGTGGCCAACGACGTCAGACCCGCGGCCAGGGATGGGTCATATTTGCAGGTCATGGGCGCTCTGGGCGCTTATCTGCACACGCCTAACACTTTCAAAGCAGTCGAAACTCCGTACTTTCTGTCCCAAGACCGATGTAATTTCCCCATATACATTTCGTCAGCAGGAGTTCCTTACCACGCGCTGTTCACCCCATCGGAGCTGTCACTCTCGGCGCTGAAGCATTGCCGCCGGCGAAAAGCGAGAACTGTTTTCTCTGATCCGCAATTGACAGGTCTGGAAAAGCGTTTTGAATCACAGCGCTACCTCTCAACACCAGAGAGGGTGGAGCTGGCTGGAGCGCTCAACCTGTCGGAGACACAAGTGAAGACCTGGTTCCAGAACAGACGGATGAAGCACAAGAAGCAGATGAGGAAACAGCAGCAGCACTCTCCATCCCCAATGTCTTCCATGAGTTTTTAA
>DPOGS204965-PA
MNQDIRSDSPNKEQKTSFLIEDILYRGRNTFKQPESRRFDYEPKYYPVANDVRPAARDGSYLQVMGALGAYLHTPNTFKAVETPYFLSQDRCNFPIYISSAGVPYHALFTPSELSLSALKHCRRRKARTVFSDPQLTGLEKRFESQRYLSTPERVELAGALNLSETQVKTWFQNRRMKHKKQMRKQQQHSPSPMSSMSF-