DPOGS204999 | ||
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Transcript | DPOGS204999-TA | 222 bp |
Protein | DPOGS204999-PA | 73 aa |
Genomic position | DPSCF300123 + 228228-229277 | |
RNAseq coverage | 305x (Rank: top 37%) |
Annotation | ||||
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Heliconius | HMEL009474 | 6e-34 | 83.56% |   |
Bombyx | BGIBMGA004231-TA | 3e-15 | 44.78% |   |
Drosophila | CG11015-PA | 7e-18 | 48.61% |   |
EBI UniRef50 | UniRef50_Q7Q8A5 | 6e-19 | 56.16% | AGAP008724-PA n=3 Tax=Neoptera RepID=Q7Q8A5_ANOGA |
NCBI RefSeq | XP_001846439.1 | 1e-20 | 58.33% | cytochrome c oxidase, subunit VB [Culex quinquefasciatus] |
NCBI nr blastp | gi|170037183 | 4e-19 | 58.33% | cytochrome c oxidase, subunit VB [Culex quinquefasciatus] |
NCBI nr blastx | gi|170037183 | 2e-20 | 58.33% | cytochrome c oxidase, subunit VB [Culex quinquefasciatus] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005740 | 3.7e-22 | mitochondrial envelope | |
GO:0004129 | 3.7e-22 | cytochrome-c oxidase activity | ||
KEGG pathway | cqu:CpipJ_CPIJ004829 | 5e-20 |   | |
  | K02265 (COX5B) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Cardiac muscle contraction | |
  |   |   | Parkinson's disease | |
InterPro domain | [2-70] IPR002124 | 3.7e-22 | Cytochrome c oxidase, subunit Vb | |
Orthology group | MCL10510 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204999-TA
ATGGCTGGAGAGTGTGATCCGTTCCGCATTATGGCCATCAAAAAAGGTCCAGGTACTTGGGAAAGGCCGAATCTCATCCCGAGTGCGTTTAGGAAGCGTCTGGTTGGCTGTGTTTGTTATCCTGATACCAACCACATAGAATACATGTGGATACATCTCGGCGAACCGAAGCGCTGCGGATGTGGTTACTGGTTCGAACTGTGTCCTATCGCACCCCTTTAA
>DPOGS204999-PA
MAGECDPFRIMAIKKGPGTWERPNLIPSAFRKRLVGCVCYPDTNHIEYMWIHLGEPKRCGCGYWFELCPIAPL-