Monarch geneset OGS2.0

DPOGS204999
TranscriptDPOGS204999-TA222 bp
ProteinDPOGS204999-PA73 aa
Genomic positionDPSCF300123 + 228228-229277
RNAseq coverage305x (Rank: top 37%)
Annotation
HeliconiusHMEL0094746e-3483.56% 
BombyxBGIBMGA004231-TA3e-1544.78% 
DrosophilaCG11015-PA7e-1848.61% 
EBI UniRef50UniRef50_Q7Q8A56e-1956.16%AGAP008724-PA n=3 Tax=Neoptera RepID=Q7Q8A5_ANOGA
NCBI RefSeqXP_001846439.11e-2058.33%cytochrome c oxidase, subunit VB [Culex quinquefasciatus]
NCBI nr blastpgi|1700371834e-1958.33%cytochrome c oxidase, subunit VB [Culex quinquefasciatus]
NCBI nr blastxgi|1700371832e-2058.33%cytochrome c oxidase, subunit VB [Culex quinquefasciatus]
Group
Gene OntologyGO:00057403.7e-22mitochondrial envelope
GO:00041293.7e-22cytochrome-c oxidase activity
KEGG pathwaycqu:CpipJ_CPIJ0048295e-20 
 K02265 (COX5B)maps-> Huntington's disease
    Oxidative phosphorylation
    Alzheimer's disease
    Cardiac muscle contraction
    Parkinson's disease
InterPro domain[2-70] IPR0021243.7e-22Cytochrome c oxidase, subunit Vb
Orthology groupMCL10510 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204999-TA
ATGGCTGGAGAGTGTGATCCGTTCCGCATTATGGCCATCAAAAAAGGTCCAGGTACTTGGGAAAGGCCGAATCTCATCCCGAGTGCGTTTAGGAAGCGTCTGGTTGGCTGTGTTTGTTATCCTGATACCAACCACATAGAATACATGTGGATACATCTCGGCGAACCGAAGCGCTGCGGATGTGGTTACTGGTTCGAACTGTGTCCTATCGCACCCCTTTAA

Protein sequence:

>DPOGS204999-PA
MAGECDPFRIMAIKKGPGTWERPNLIPSAFRKRLVGCVCYPDTNHIEYMWIHLGEPKRCGCGYWFELCPIAPL-