Monarch geneset OGS2.0

DPOGS205030
TranscriptDPOGS205030-TA3291 bp
ProteinDPOGS205030-PA1096 aa
Genomic positionDPSCF300288 + 200353-210494
RNAseq coverage342x (Rank: top 34%)
Annotation
HeliconiusHMEL0051190.077.61% 
BombyxBGIBMGA010358-TA0.081.06% 
DrosophilaRapgap1-PD4e-6639.39% 
EBI UniRef50UniRef50_E0VP230.053.78%Rap GTPase-activating protein, putative n=1 Tax=Pediculus humanus corporis RepID=E0VP23_PEDHC
NCBI RefSeqXP_002427867.10.053.78%rap GTPase-activating protein, putative [Pediculus humanus corporis]
NCBI nr blastpgi|2420143760.053.78%rap GTPase-activating protein, putative [Pediculus humanus corporis]
NCBI nr blastxgi|2420143760.050.79%rap GTPase-activating protein, putative [Pediculus humanus corporis]
Group
Gene OntologyGO:00056228e-61intracellular
GO:00510568e-61regulation of small GTPase mediated signal transduction
GO:00050968e-61GTPase activator activity
GO:00055152.8e-13protein binding
KEGG pathwaymmu:204695e-128 
 K08013 (SIPA1)maps-> Leukocyte transendothelial migration
InterPro domain[427-615] IPR0003318e-61Rap/ran-GAP
[736-830] IPR0014782.8e-13PDZ/DHR/GLGF
Orthology groupMCL10564 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS205030-TA
ATGTATGCTCCGGATAATCTTCGAAGAAAGGAAATTAGAGATGCTATGTACCGCAGTAATTCGAGCCTTGACTTGATATACGCCGAACATCACACTGGTAATGGTTTGCGTCGAGAATATGGCAGCCACGGATCAATCGACGTGATCAGCGCAGCCAGTGATCGGCTTCCAGCCATGGTTCACAATTACAGCTTAAACGTCCCTGAAAAGCCGTCAAGTCTGAGCCGTGTGACGGACCGCTTTGCTGAAGTCATAGCAAGCGATCATGCTGACGGCCCTACTCCTAGAGCTAGTGTTAGTCCCAAAGCACGTCTCAAGTTAAACAAGCTCTGGGGCGGTGCAGCCCCCGTCAGCACGAGATCAGAAGATGGCATAATATCCTCGGTTTCTGATATTAATAAGAGGAAGCAATTTGCACACTATGATTGCCAATCTCTTATGGCAAACTTGAGTTATGCTGCTGAAATCCGTGGGGCGTTGTTAAGCAGACGTAGGAACACAACAACGGGTGCCTCTGCTGCATCGTTGCTTGCAACTCGAGGCTTGCCACCCGGAGAAGATGCTGTTCCAGATACGGGCGATGGTCGATCAAATGAATTGATTGACAGCTGCCCTTTCTTTAGAAATGAACTTGGTGGTGAGGAAGAAAGGTGCATATCCCTATGTTCGCGGACAGCTCGAGGTGCGATAACTGGTCAATTTGGTGGTTGGCATCGACCTAAGGCGTCTTACGGATTTTCCGTGTTGGAGTTTCCACCCGGCCAATCACATTGGAGAAACGGATGTCCATTTGTTAGAACAAGTTCGCCTCTTCCTATCGAGAGCCAGGATCAGGGGGCTTTGTACTATAGGAATTATTTTTATAGACACCCACATCAGAACTGGTTCGGTATGGATGAGAATCTTGGTCCCGTGGCAATATCTATAAAGAAAGAACGTGTTGAACTTCGTCGTGGTAATGGAGATGCTTCAGCCCCGGCGTCTCAACTCGCCTGGCAGTACCGGCTCATTGTACGGACATCAGAACTACTAACATTACGTGGGTCCATACTAGAGGACGCCTTGCCCACTGTCAAACCCAGCAACAATACAGCTACTTACAACACTAAAGAAGTATTGGATTACATTGCACCGGAATTACAGCTGAGTTGTTTGAGACTTGGGATAACAAATGGTGGTGCTGAGGAACAGTTGTTGAGATTGGACGAACAACGCGTAACAAGGCACTACAAGGTCGGTGTTATGTACTGCAAAAGTGGCCAGTCCACTGAGGAAGAGATGTATAACAATCAAGAGGCGGGCCCAGCTTTCGTAGAATTCCTTCAGATGTTGGGACAGACGGTCAGATTAAAAGATTTCGATAAATATAAAGCTGGTCTAGACAACAAAACCGATTCAACTGGCCTCTACTCAGTGTACACCACATATCAGGGCTGTGAGATCATGTTCCATGTGTCAACAATGCTTCCGTACACTCCAAACAACAGACAACAGTTGTTGAGGAAGCGACATATCGGCAACGACATTGTGACAATTGTCTTCCAAGAACCCGGGGCGGCGCCCTTCACACCACGGAATATTAGATCTCAGTTTCAGCATGTTTTTGTGGTTGTGAGGGTCATTGACCCCTGTACAGAGAACACACATTATAGTATAGCCGTAAGTCGTGCCAAAGAAGTGCCTTTATTTGGTCCACCGATTAAAGATGGAGCCATGTATCCGAAGGGTGAAGCCTTCACGGATTTACTTTTAAGTAAAGTCATAAATGGAGAAAACGCTGCGATACAATCTCCAAAATTTAGTACAATGGCGACCCGGACGAGACAAGAGTACCTGAAAGATCTGTCCAAGAATTACATAACAACAACTACAGTTGAAAGCGGACAGAAATTCTCTATATTTTCATCTCTACTGATGAAGGGCGGCGGTAATTCTAACAACAATACCATAATTCCGCGCGTCGATGATTGCGCTAATGACGTGTTAGTCAGAGGAGCGCTGTGTTACCATGTGCAAGTCCAGGATGAGGGAGCCGGTGGTTCGATATTGGACTGTATTATGGGTGTTTCTGCTGATACAATTGTTTTAGTCGAAGAAAGTTCAAGACAAATAGTCCTTGTAATGCCGACTAATACATTGCTGGGCTGGGTGGTGAGCGGTCCGTGGGTCCGTATCTACTACCACCGCGGCGAGAGTGTCCGCGTGTCATGCAGCGAGCCCCTCCTTCGCCGTGTGGGCAGCGTATCTCCTCAACACGCGCACGCTCTCTCAGAACTCACCCTGGAGAGGGGCAGCGCACCGCAATTGGGTTTCCACGTTCAAGCAGACGGTGTAGTGACAGCAGTGGAGGGCGGAGGCCCGGCAGCCCGCGCGGGCGTCCGTCGCGGAGCCCGACTGCTGGAAGTGTGCCGCGCGGCTGTCGTAGCGCTGCCGCACGAAAACCTCGTGGACCTGCTGAAAACATCCGACCCGGTCACCATTCGTCTAACATTCGCGGCGGGTGCGCGTTGTGAATGTCAAAGTTCGTGCGGCGAGGCTTGGGGTCAACAGCCGTCACGACGACGACTGTCACCACCGAGATCTGATACCTCAGGATATGGAACCGGTGGTTCAGGTCGTAGTACTACATCGGGCCCTGATGTACGTCGGCGGTCTCACGAAGACGCTTCCCCGAGACATTCTCGCCGGCCGCGTTCTACTGCACATTCCTCGCTGACGGAGGAATTGATGTGCATAATGGACGCCGAACTCGGTGAGAACAATCGCGGTGGCAGTGGTGGTGTCGCGAACACGAACAGCACCAACAGTATGTCTTCCACAAACAACATGTCTACCACCAACAGTGTATCTACCACCAATTCAGCACCCCTGCCACTCCCAGACGCCGCGGCGTTGGACTGGGCCGCCTTAGTTCATACTGCTACCAGGGCTATGTTGCAGATTTGTGAAGAACACCAATATCCATCGATCGATAACGCGGACGTGCCGTCTGAAACAAGCGAAGTGGCTCTAGACACGTGGTCTGAGATACCCACCAGCGAGCCATCGGATAGCGTGACCAGTTCGAGTGTTGTCGGTGTTAGCGGAAGCGGATGTGTTTGTGGTCTGGCGGCGAGGGTGGTGGCCTTAGAGGCGGACGCAGCCTCCGCACAGAGACACAGACATCATCTCGAGGAGGAGGTCCGGCGTCTGCGTGTCCACAACTCCCGTCTGCGAGAGGAGTCAGCCCGCGCCGTGTGGCAGCTGAGACACTTTACACAGTGGCTCAAAAGAACCGTCGACAAGCAATGA

Protein sequence:

>DPOGS205030-PA
MYAPDNLRRKEIRDAMYRSNSSLDLIYAEHHTGNGLRREYGSHGSIDVISAASDRLPAMVHNYSLNVPEKPSSLSRVTDRFAEVIASDHADGPTPRASVSPKARLKLNKLWGGAAPVSTRSEDGIISSVSDINKRKQFAHYDCQSLMANLSYAAEIRGALLSRRRNTTTGASAASLLATRGLPPGEDAVPDTGDGRSNELIDSCPFFRNELGGEEERCISLCSRTARGAITGQFGGWHRPKASYGFSVLEFPPGQSHWRNGCPFVRTSSPLPIESQDQGALYYRNYFYRHPHQNWFGMDENLGPVAISIKKERVELRRGNGDASAPASQLAWQYRLIVRTSELLTLRGSILEDALPTVKPSNNTATYNTKEVLDYIAPELQLSCLRLGITNGGAEEQLLRLDEQRVTRHYKVGVMYCKSGQSTEEEMYNNQEAGPAFVEFLQMLGQTVRLKDFDKYKAGLDNKTDSTGLYSVYTTYQGCEIMFHVSTMLPYTPNNRQQLLRKRHIGNDIVTIVFQEPGAAPFTPRNIRSQFQHVFVVVRVIDPCTENTHYSIAVSRAKEVPLFGPPIKDGAMYPKGEAFTDLLLSKVINGENAAIQSPKFSTMATRTRQEYLKDLSKNYITTTTVESGQKFSIFSSLLMKGGGNSNNNTIIPRVDDCANDVLVRGALCYHVQVQDEGAGGSILDCIMGVSADTIVLVEESSRQIVLVMPTNTLLGWVVSGPWVRIYYHRGESVRVSCSEPLLRRVGSVSPQHAHALSELTLERGSAPQLGFHVQADGVVTAVEGGGPAARAGVRRGARLLEVCRAAVVALPHENLVDLLKTSDPVTIRLTFAAGARCECQSSCGEAWGQQPSRRRLSPPRSDTSGYGTGGSGRSTTSGPDVRRRSHEDASPRHSRRPRSTAHSSLTEELMCIMDAELGENNRGGSGGVANTNSTNSMSSTNNMSTTNSVSTTNSAPLPLPDAAALDWAALVHTATRAMLQICEEHQYPSIDNADVPSETSEVALDTWSEIPTSEPSDSVTSSSVVGVSGSGCVCGLAARVVALEADAASAQRHRHHLEEEVRRLRVHNSRLREESARAVWQLRHFTQWLKRTVDKQ-