DPOGS205111 | ||
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Transcript | DPOGS205111-TA | 876 bp |
Protein | DPOGS205111-PA | 291 aa |
Genomic position | DPSCF300172 - 31933-34327 | |
RNAseq coverage | 186x (Rank: top 49%) |
Annotation | ||||
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Heliconius | HMEL014696 | 3e-152 | 90.14% |   |
Bombyx | BGIBMGA005878-TA | 2e-135 | 88.01% |   |
Drosophila | TfIIEbeta-PA | 3e-111 | 69.07% |   |
EBI UniRef50 | UniRef50_O96881 | 4e-109 | 69.07% | IP01109p n=32 Tax=Arthropoda RepID=O96881_DROME |
NCBI RefSeq | XP_001864405.1 | 4e-124 | 72.03% | transcription initiation factor IIE subunit beta [Culex quinquefasciatus] |
NCBI nr blastp | gi|170057259 | 8e-123 | 72.03% | transcription initiation factor IIE subunit beta [Culex quinquefasciatus] |
NCBI nr blastx | gi|118786363 | 1e-122 | 74.83% | AGAP005382-PA [Anopheles gambiae str. PEST] |
Group | ||||
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Gene Ontology | GO:0005673 | 2.2e-139 | transcription factor TFIIE complex | |
GO:0006367 | 2.2e-139 | transcription initiation from RNA polymerase II promoter | ||
KEGG pathway | cqu:CpipJ_CPIJ013475 | 1e-123 |   | |
  | K03137 (TFIIE2) | maps-> | Basal transcription factors | |
InterPro domain | [1-283] IPR016656 | 2.2e-139 | Transcription initiation factor TFIIE, beta subunit | |
[58-139] IPR011991 | 5.3e-39 | Winged helix-turn-helix transcription repressor DNA-binding | ||
[64-138] IPR003166 | 2.6e-29 | Transcription factor TFIIE beta subunit, DNA-binding domain | ||
Orthology group | MCL13587 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS205111-TA
ATGGATCCAGCACTTCTGAGAGAGCGGGAGGCGTTCAGGAAAAAGGCACTTGCAACGCCGAGTGTTGAGAAAAAGAAGAGAGATGATTCCTTTAAAGATGATAGCAAGAAGAAATCGAAATCATCAAGCTCAGCAAATGCTGCCCCAAAAATTGATGCCACCAATTACAAGACGATGGCTGGCAGTTCCTCCTATCGTTTTGGTGTGTTGGCTCGCATCGTCAGACACATGAAGTCCAGACACCAAGAAGGGGATGACCATCCGCTGTCGATTGATGAAATTTTAGATGAAACAAATCAGTTAGATGTTGGAAGTAAAATTAAACAGTGGCTTCAGACTGAAGCGTTACAGAATAATCCTAAAATAGAGCACACATTTGACGGAAAGTTTATATTTAAACCAGTTTATAAAATTAAGGACAAGAAATCATTACTGAGATTACTGAAGCAACATGATTTAAAAGGTCTAGGGGGGATTTTTCTAGAGGACGTCCAAGAATCATTGCCGCACTGCGACAGAGCATTGAAAAGTTTAGCGCAAGAAATATTATACATAACAAGACCCTCAGATAAAAAGAAAATTTTGTTTTATAATGACAAAACCGCCACTTTAGATGTTGACGAAGAGTTTGTGAAATTATGGCGAGCCACGGCCGTAGATGCCATGGACGACGCCAAGATAGAGGAATACTTGGAGAAGCAAGGCATCAAATCAATGCAGGACCACGGCCCAAGGAAACCTGTGGTGCCCAAACGGAAGAAGGTCACCCAGAAGAGGAGGCAGTTCAAGAAACCCAGGGACAATGAACATCTGGCTGACGTACTCGAAACGTACGAAGATAATACGCTGACACAAAAAGGTGTCAGTATTAAATGA
>DPOGS205111-PA
MDPALLREREAFRKKALATPSVEKKKRDDSFKDDSKKKSKSSSSANAAPKIDATNYKTMAGSSSYRFGVLARIVRHMKSRHQEGDDHPLSIDEILDETNQLDVGSKIKQWLQTEALQNNPKIEHTFDGKFIFKPVYKIKDKKSLLRLLKQHDLKGLGGIFLEDVQESLPHCDRALKSLAQEILYITRPSDKKKILFYNDKTATLDVDEEFVKLWRATAVDAMDDAKIEEYLEKQGIKSMQDHGPRKPVVPKRKKVTQKRRQFKKPRDNEHLADVLETYEDNTLTQKGVSIK-