Monarch geneset OGS2.0

DPOGS205122
TranscriptDPOGS205122-TA4047 bp
ProteinDPOGS205122-PA1348 aa
Genomic positionDPSCF300471 - 39282-53174
RNAseq coverage847x (Rank: top 15%)
Annotation
HeliconiusHMEL0215930.058.86% 
BombyxBGIBMGA011198-TA0.058.14% 
Drosophilaplx-PC0.044.28% 
EBI UniRef50UniRef50_F4W7760.042.33%TBC1 domain family member 1 n=10 Tax=Formicidae RepID=F4W776_ACREC
NCBI RefSeqXP_001599903.10.039.31%PREDICTED: similar to Pollux protein [Nasonia vitripennis]
NCBI nr blastpgi|3454920810.039.31%PREDICTED: TBC1 domain family member 4-like isoform 2 [Nasonia vitripennis]
NCBI nr blastxgi|3287797050.038.94%PREDICTED: TBC1 domain family member 4 isoform 2 [Apis mellifera]
Group
Gene OntologyGO:00050976.7e-58Rab GTPase activator activity
GO:00056226.7e-58intracellular
GO:00323136.7e-58regulation of Rab GTPase activity
GO:00055154.2e-18protein binding
KEGG pathway 
InterPro domain[739-996] IPR0001956.7e-58Rab-GAP/TBC domain
[310-394] IPR0119934.2e-18Pleckstrin homology-type
[633-685] IPR0217854.3e-15Protein of unknown function DUF3350
[291-405] IPR0060205e-12Phosphotyrosine interaction domain
Orthology groupMCL11316 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS205122-TA
ATGCATCCGAACCGTCCTATGTTCGGTTCCCACTCGGACACATCCGCTATAAACATGAAAAATTTGGTGACAGATTTATTCAGTCAGATGCGGGATCCTTCACCAGGGACCCAGAGTCCTAAGGGCTCAACTGGGTCCCTCAACGTCACTAGGAACGTAGGATTCCAGCTGCAGAATGGATCTGAACACCTTCCTTGGAGTAACCCCGCTATATCTTTACCTGGAAATTGCAATTCTAATTTGACAAACGAATCTGGACTTGTTAGAAGTTTGAGCAACGCTTCAGCACTAACATCACTATGCGCTGATTTATCTCCGTCTGATTCACATTTTTTTGAGGTTTCCCAGGATAGTAATGATTCGTCAAGAACATCACCCGAAAAGGCTTTAGAGGAATTTAGAAAAACCAACTACATAATGCCAAGTAGCACACCATTAGAGCCAGATAAGAATGTTGCTTGGAAAAGTGCTGAGAATCTTAAAAAACAAGAAAGCAGTGAGGTTGATGAGGAATTTGATGTATTTACCAAAGAAAGAGTTGAGAGTGTCAAAAAGATGGTACCTTTGGAACCGGCTGTAGTTGTTATAAATGTGACAAAAAATAATTTGGGCACCGTAACTGAGGATGAAGAGAAACAGGACAACATAGATGGCAATGATGCTGCCAAGACAGGGAAGGATACCGATCCTCCTAAAGAGAACGATCTTGTAAATAACAAATTAGCTGATCCACTGTTAAATAAACCTTTGGAAGTCACTAACAAACAATCAGACGAACAAACTAAGGTTGAGCAATTTAGTTTCGGTGAAATACCTAGGAAGCCGAATAAAGAGAAAAAACAATTACCCGATAACAAGCCCTTCCTGAGAGACAGATCAGCTTCCATTGGTGCCTTGAGTTTGAAAACCCCGATCGCTCACTTGATCGGGGAACAGAATAGGACTATGCTATTTCAGGTTGCTAGATCAGAACTCCGTCTAATAAGTCCAGATAGGAAACAAATACTTTTACACAGAGCATTCAAAGATGTCGCTAGTTGTGTGCTAGGTAGGAGTAATAAAGAGCACTTCGGATTCGTGTGTAGGGAGACTAACGAGAGCTACGCTTGTTACGTGTTCAAATGCGAGAGTGACTCCGTCGCCAACGAAGTAGTCAGTGCGATCAAACAAGCGTTCGTAGCTCACGCTGAGTTGTTAAAAAAATCACGGGACAAATCCCCTAACATGACCTGCGAACACTGTCCGATGTTGTGGTACCACAGACTGTGTCATGATATTGAAGGTATGAACGAAAAAAAGACCCACGCGTTCATACTCCGTCGCATAGAACAGCTGCCTGATGATGAACAGGAAATCATCATCACGAAGTATCAAGGTGGAACTAACCACATGTATGAGGTGAGCGAACACAACGCTTTCTTAATGATGTTGTTGAGAGCTCACTGCGAGTCCAAACAGAAAAGACATGTACACGACACGGCTGAGAACAGGTCGGAGTTCCTCAATCAATATCTCGGAGGTAGCACAATATTTATGAAAGCAAAGCGTTCTCTGTCGAGTGGTTTCGATCATCTGCTGAAGAGGAGACAGAGCAAGGATGAAGGGAATCTACTGCAACTCCCGCGGAAGGATATTTCTCTGAGTCCAGCCCGACCGAGTTCAGAGTCGGATCATCCTGAGTCACCGGACAACCAGAGGAAAGCAACCTCACCTGGTTACGAACCACCAGCTACGAAAGAAATTGTTACGCCAGACGACACAAATGATAACAAAGAAGACTCAAAAGCTGTCAATAGTCCCATGATGGACATCTTCCTAAAAGTGAGCGACAGTCGCACATCAGCTGCCGGAAATAACGAAAAAGATTCAACATGGCGCCAGGCGATATATGAGAAAGTTCTACAACCGAACATAGAACAAGAAGATCTCAGTCAATCAAACCAACGGCCGTCACGGACGACGAGACGGTCGAGAGAAGAATTGAGACAGCTGTGGAAGATGGCCATCGACCAGACGGTGCTGCTGGTGAGGATGGAAAAAGAAAACCAGAGACTGAGAGAGGGCGAGGAATCATCGGCTGTTCGGCGCATAAAGCTAGAATACACTGAGCTTGACACTTGTGCTCCCGGCGTGTCGCTCATGTGGGACGACCTGTTGTCCCGAGACAGATCTCACCCGGTCGCCAAAATAGATAGACACATGCTCACGCAGGCTGTGAGACAAGGCGTTCCTCGCATGTCTAGAGGCGGCGTCTGGTACATCCTGGCTGAACAAGCCTGCATCCGGATCCCTCCGCCGGATGTCAAACAGTTTCCGTTATACAACACGCCGTACGCCACACTATTATCTGGTCTCACTAAACACCAACACGCCATTTTGATTGACCTCGGCAGGACGTTCCCAAAGCATTCCTACTTCGCATCAGCCCTGGGTCCAGGTCAGCTGGCCCTGTACAATATACTGAAGGCGTACTCCCTGTTGGACCCCGATGTGGGCTACTGCCAGGGACTGAGCTTTGTGGCTGGGATACTCTTACTACATATGGAAGAAGCGGAGGCGTTTGCTCTTCTTCGTCATCTGATGTTCCGACGCGGGATCAGAAAACAATATCTGCCAGACATGAACGCGCTCCAGGTTCAGGTCGATGAGGTCCTAGTTCACTCCAGGACGAATTTCGTGAAGGTCGCAAAAAACCTGTTGTTATTCCGGAAACCATTGGTAGTGCAAGATCGTCACGTGCCTATCCTGTACCAGCTGTCGCGGCTGGTCCGTGACCGCGAGCCAGAACTCCACCGTCACCTGGAAGCGCTGGATATTTCACCAGCTCTGTACGCCGCACCATGGATGCTTACGCTCTTCACCAGCCAGTTCCCTCTCGGTTTCGTTGTGAGGGTGTTCGATCTCATATTTTTGGAGTCATTCGACGTGGTCTTTTCGCTATCCCTGAGTCTACTGTCGGTGCACAAAGACGGTCTCATGCTGTGTGAAAGTTGCGAAGAAGCTGCCGAATATCTGAAGCACAAGTTACCCGACATGAACAAAGGAGTGTACGACAAGGTCATGAAAATGGTCGCCAAGCTGGACATAAGCCGTCAGCTGACAGAGTATGAAGTGGAATACAGCGTGCTGAGAGAGGAAATGCCTCGTCTGGCGCTACTCACGGAACAGAACAGACAGCTGGTGAATAGTACGGCCAGGATGAAGGAGGAGATCGATTCCGCAATGAACGCTATAGAAAACTATCAGAAAACGCAGACGAACCTCGAAAACCAGAACAAGACGATGGAACAACACCTGACTCTACTGAGCCGCTACATCTCCGCCCACAAACAGGACCTGCCGCCCGAGATAAGGAGAATAGCCAACGTGTACTGCAAAAAACTGTCGTTCGGCTCAAAAATCATCACCAAATTCACTTCCAACGATGACGACGGGGACAAAAAGAGTTACAAACAAGGGATCAGCGCCCCGGACCTGTTCGCTAAAACCAGCAGGGAGGAGGTTCTGGACGCGATGAAAAATGACGAGAGGAGGTCTATCAAGAAATCGCAATCCGTGCATCTGCTCGTCCAAAAACATTATCCGCTAAAGGTCCTCGAAGAAAAAACAGAAACACCAAAGAGAGACAGTTTGAGAATTGAGAACATAGCCAACGAGACGATAAGAGATTTAGGGAAAAGGACCTCCGGGTACATAAACGACAGTCACGAACAGATACAGCAAGAGAGGTTGTTCGAGAGGCAGCTGAAGCACGACTTCGACGAGAACTTACGGAAACTAGACGAGAAATTAACGACGAAATCATATCTGGACGACATCAGTATTTTCCAGAGCAAGAAGTCCATGTCTCTGAACCTGAGGCCCAAAGAGGAGAAGACTGACAGCGGGTTCGTGACGCCCATGAGCCCAGCAGACAACAGGAACGACAGCAGTTCACTGACCTCTCACCCGTTGAGCGACTGCGATGTGGACATCAAATTTGACGGACAACTCACCAAGCTGAAACAAATCCGACCGTTCAGGAACAGTAGTCTGTATAACCAATGA

Protein sequence:

>DPOGS205122-PA
MHPNRPMFGSHSDTSAINMKNLVTDLFSQMRDPSPGTQSPKGSTGSLNVTRNVGFQLQNGSEHLPWSNPAISLPGNCNSNLTNESGLVRSLSNASALTSLCADLSPSDSHFFEVSQDSNDSSRTSPEKALEEFRKTNYIMPSSTPLEPDKNVAWKSAENLKKQESSEVDEEFDVFTKERVESVKKMVPLEPAVVVINVTKNNLGTVTEDEEKQDNIDGNDAAKTGKDTDPPKENDLVNNKLADPLLNKPLEVTNKQSDEQTKVEQFSFGEIPRKPNKEKKQLPDNKPFLRDRSASIGALSLKTPIAHLIGEQNRTMLFQVARSELRLISPDRKQILLHRAFKDVASCVLGRSNKEHFGFVCRETNESYACYVFKCESDSVANEVVSAIKQAFVAHAELLKKSRDKSPNMTCEHCPMLWYHRLCHDIEGMNEKKTHAFILRRIEQLPDDEQEIIITKYQGGTNHMYEVSEHNAFLMMLLRAHCESKQKRHVHDTAENRSEFLNQYLGGSTIFMKAKRSLSSGFDHLLKRRQSKDEGNLLQLPRKDISLSPARPSSESDHPESPDNQRKATSPGYEPPATKEIVTPDDTNDNKEDSKAVNSPMMDIFLKVSDSRTSAAGNNEKDSTWRQAIYEKVLQPNIEQEDLSQSNQRPSRTTRRSREELRQLWKMAIDQTVLLVRMEKENQRLREGEESSAVRRIKLEYTELDTCAPGVSLMWDDLLSRDRSHPVAKIDRHMLTQAVRQGVPRMSRGGVWYILAEQACIRIPPPDVKQFPLYNTPYATLLSGLTKHQHAILIDLGRTFPKHSYFASALGPGQLALYNILKAYSLLDPDVGYCQGLSFVAGILLLHMEEAEAFALLRHLMFRRGIRKQYLPDMNALQVQVDEVLVHSRTNFVKVAKNLLLFRKPLVVQDRHVPILYQLSRLVRDREPELHRHLEALDISPALYAAPWMLTLFTSQFPLGFVVRVFDLIFLESFDVVFSLSLSLLSVHKDGLMLCESCEEAAEYLKHKLPDMNKGVYDKVMKMVAKLDISRQLTEYEVEYSVLREEMPRLALLTEQNRQLVNSTARMKEEIDSAMNAIENYQKTQTNLENQNKTMEQHLTLLSRYISAHKQDLPPEIRRIANVYCKKLSFGSKIITKFTSNDDDGDKKSYKQGISAPDLFAKTSREEVLDAMKNDERRSIKKSQSVHLLVQKHYPLKVLEEKTETPKRDSLRIENIANETIRDLGKRTSGYINDSHEQIQQERLFERQLKHDFDENLRKLDEKLTTKSYLDDISIFQSKKSMSLNLRPKEEKTDSGFVTPMSPADNRNDSSSLTSHPLSDCDVDIKFDGQLTKLKQIRPFRNSSLYNQ-