| DPOGS205184 | ||
|---|---|---|
| Transcript | DPOGS205184-TA | 396 bp |
| Protein | DPOGS205184-PA | 131 aa |
| Genomic position | DPSCF300197 + 258135-259366 | |
| RNAseq coverage | 202x (Rank: top 47%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009983 | 3e-68 | 90.84% | |
| Bombyx | BGIBMGA000879-TA | 1e-67 | 88.55% | |
| Drosophila | PrBP-PA | 2e-52 | 69.47% | |
| EBI UniRef50 | UniRef50_O43924 | 1e-56 | 78.63% | Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta n=103 Tax=Opisthokonta RepID=PDE6D_HUMAN |
| NCBI RefSeq | XP_002429085.1 | 1e-60 | 82.44% | restnal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase, putative [Pediculus humanus corporis] |
| NCBI nr blastp | gi|242017211 | 3e-59 | 82.44% | restnal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase, putative [Pediculus humanus corporis] |
| NCBI nr blastx | gi|242017211 | 2e-57 | 82.44% | restnal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase, putative [Pediculus humanus corporis] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | phu:Phum_PHUM419850 | 4e-60 | ||
| K13758 (PDE6D) | maps-> | Purine metabolism | ||
| InterPro domain | [1-131] IPR014756 | 5e-50 | Immunoglobulin E-set | |
| [1-130] IPR008015 | 4.4e-42 | GMP phosphodiesterase, delta subunit | ||
| Orthology group | MCL14866 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS205184-TA
ATGACTCTGAGGGATGTGGACACAGGCAAGATTCTTTGGCAGCATAATCTGGATATGTCCAGTCCGGATGTGGAACATGAGGCTCGTGTTCCAAAGCGCATCCTCAAGTCGAGAGTTGTATCAAGAGAGATGAACTTCAGTTCTGTGGAGTCAATCAGCAAATTTCGCTTGGAACAGAAAGTTCTCTTCAAAGGCAGATGTTTAGAGGAATGGTTCTTTGAATTTGGCTTTGTCATTGCAAACTCGACAAACACATGGCAGTCTATCATAGAATCGGCTCCCGAGTCACAAATGATGCCCGCCAATGTACTTAATGGAAATGTGATCATAGAAACGAAATTCTTCGATGGCGATCTTCTCATCACCACATCGCGAGTGAGGCTCTTCTACGTTTGA
>DPOGS205184-PA
MTLRDVDTGKILWQHNLDMSSPDVEHEARVPKRILKSRVVSREMNFSSVESISKFRLEQKVLFKGRCLEEWFFEFGFVIANSTNTWQSIIESAPESQMMPANVLNGNVIIETKFFDGDLLITTSRVRLFYV-