| DPOGS205205 | ||
|---|---|---|
| Transcript | DPOGS205205-TA | 282 bp |
| Protein | DPOGS205205-PA | 93 aa |
| Genomic position | DPSCF300265 - 238654-242489 | |
| RNAseq coverage | 0x (Rank: top 96%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL014753 | 2e-22 | 100.00% | |
| Bombyx | BGIBMGA003901-TA | 1e-22 | 57.45% | |
| Drosophila | ATPsyn-beta-PA | 1e-20 | 91.30% | |
| EBI UniRef50 | UniRef50_P06576 | 2e-18 | 84.00% | ATP synthase subunit beta, mitochondrial n=9304 Tax=root RepID=ATPB_HUMAN |
| NCBI RefSeq | XP_001626437.1 | 2e-19 | 93.48% | predicted protein [Nematostella vectensis] |
| NCBI nr blastp | gi|380021893 | 9e-19 | 83.02% | PREDICTED: ATP synthase subunit beta, mitochondrial-like [Apis florea] |
| NCBI nr blastx | gi|380021893 | 2e-17 | 83.02% | PREDICTED: ATP synthase subunit beta, mitochondrial-like [Apis florea] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005524 | 1.3e-11 | ATP binding | |
| GO:0033178 | 8e-07 | proton-transporting two-sector ATPase complex, catalytic domain | ||
| GO:0015991 | 8e-07 | ATP hydrolysis coupled proton transport | ||
| GO:0016820 | 8e-07 | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | ||
| KEGG pathway | zro:ZYRO0D01760g | 5e-19 | ||
| K02133 (ATPeF1B, ATP5B) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Parkinson's disease | ||||
| InterPro domain | [1-47] IPR000194 | 1.3e-11 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain | |
| [53-91] IPR024034 | 1.1e-07 | ATPase, F1 complex beta subunit/V1 complex, C-terminal | ||
| [59-91] IPR000793 | 8e-07 | ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS205205-TA
ATGAACGAGCCCCCGGGAGCCAGAGCTCGTGTCGCCCTCACTGGGTTGACCCTCGCCGAGCACTTTAGGGACAAGGAAGGACAGGATGTGCTGCTGTTCGTTGATAACATCTTCAGATTCACTCAAGCCGGTTCCGAGTATGATCAAATTAATCGTATAGATCCCTTTCGCCCTAAGATTCTGATGGGTGAGTTGGACCACATCCCTGAAGCTGCTTTCTACATGGTGGGCACTATAGAGGACGTGATCGCCAAGTCACAGGCTCTAGCCAAATCAGTCTAG
>DPOGS205205-PA
MNEPPGARARVALTGLTLAEHFRDKEGQDVLLFVDNIFRFTQAGSEYDQINRIDPFRPKILMGELDHIPEAAFYMVGTIEDVIAKSQALAKSV-