DPOGS205218 | ||
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Transcript | DPOGS205218-TA | 384 bp |
Protein | DPOGS205218-PA | 127 aa |
Genomic position | DPSCF300265 - 633-3699 | |
RNAseq coverage | 1x (Rank: top 93%) |
Annotation | ||||
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Heliconius | HMEL007020 | 5e-18 | 92.31% |   |
Bombyx | BGIBMGA014398-TA | 7e-34 | 95.38% |   |
Drosophila | eRF1-PF | 8e-30 | 86.36% |   |
EBI UniRef50 | UniRef50_P62495 | 5e-23 | 72.06% | Eukaryotic peptide chain release factor subunit 1 n=438 Tax=root RepID=ERF1_HUMAN |
NCBI RefSeq | NP_001040243.1 | 2e-32 | 95.38% | eukaryotic translation termination factor 1 [Bombyx mori] |
NCBI nr blastp | gi|114052402 | 6e-31 | 95.38% | eukaryotic translation termination factor 1 [Bombyx mori] |
NCBI nr blastx | gi|114052402 | 6e-30 | 95.38% | eukaryotic translation termination factor 1 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0006415 | 7.2e-43 | translational termination | |
GO:0016149 | 7.2e-43 | translation release factor activity, codon specific | ||
GO:0005737 | 7.2e-43 | cytoplasm | ||
KEGG pathway |   | |||
InterPro domain | [56-120] IPR004403 | 7.2e-43 | Peptide chain release factor eRF1/aRF1 | |
[55-96] IPR005142 | 6.4e-12 | eRF1 domain 3 | ||
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS205218-TA
ATGACAAGAAGACAGCTGGCCGTGAACTTGGCTCGTGCAGTCCAGCCGTTATGTGTACTCGAATCAGACTTCGGGTTCAAAATAAACTGTGCCTTCAAAAAATCAGGACTATTCAGAGTAAGGAATCTGGGTGGAGTTAAAGCTCACGCTAGCATAGGTGAGGATGACACAGGAAAATACTGTTTTGGTGTCGATGATACATTAAGGGCTTTGGAACTCGGAGCTGTTGAGACACTCATATGCTGGGAAAATCTAGACATTCAAAGATATGTTTTGAAATCTCACGCAACCAGCCAGGAGACTATCTTGCATCTGACACCGGAACAGGAAAAAGACAAGTCACACTTCACCGACAAAGACGTGAGTAGACTTGATTTGATTTAA
>DPOGS205218-PA
MTRRQLAVNLARAVQPLCVLESDFGFKINCAFKKSGLFRVRNLGGVKAHASIGEDDTGKYCFGVDDTLRALELGAVETLICWENLDIQRYVLKSHATSQETILHLTPEQEKDKSHFTDKDVSRLDLI-