Monarch geneset OGS2.0

DPOGS205351
TranscriptDPOGS205351-TA978 bp
ProteinDPOGS205351-PA325 aa
Genomic positionDPSCF300295 + 108289-109906
RNAseq coverage367x (Rank: top 32%)
Annotation
HeliconiusHMEL0061561e-10768.49% 
BombyxBGIBMGA007263-TA5e-9957.91% 
DrosophilaCG13096-PA2e-3031.38% 
EBI UniRef50UniRef50_E2B9B71e-5340.54%Ribosomal L1 domain-containing protein 1 n=8 Tax=Formicidae RepID=E2B9B7_HARSA
NCBI RefSeqXP_623930.22e-5440.85%PREDICTED: similar to ribosomal L1 domain containing 1 [Apis mellifera]
NCBI nr blastpgi|3838541149e-5641.46%PREDICTED: ribosomal L1 domain-containing protein 1-like [Megachile rotundata]
NCBI nr blastxgi|3838541144e-5539.87%PREDICTED: ribosomal L1 domain-containing protein 1-like [Megachile rotundata]
Group
Gene OntologyGO:00037232.1e-35RNA binding
GO:00159342.1e-35large ribosomal subunit
GO:00064122.1e-35translation
GO:00037352.1e-35structural constituent of ribosome
GO:00058402.8e-07ribosome
GO:00056222.8e-07intracellular
KEGG pathwaydpo:Dpse_GA120448e-29 
 K06670 (SCC1, MCD1, RAD21)maps-> Cell cycle - yeast
    Cell cycle
InterPro domain[19-235] IPR0021432.1e-35Ribosomal protein L1
[5-241] IPR0236743e-32Ribosomal protein L1, superfamily
[176-241] IPR0160942.8e-07Ribosomal protein L1, 2-layer alpha/beta-sandwich
Orthology groupMCL13709 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS205351-TA
ATGCCTTCTAAAGCGGTTACAGATGAGATCGTAATCTCGGCTTTAACTGCCTTAGAAAAATTAACAGCTCATACTTCTAACAAAAATATTATATTTGGTGACGAACATCAAATATTCATGGAGATTCGATGCATTAAAATACCACACTCTAAAGGGAACATCAAATTTGTACTCCCGCACAGTACAGTATTATCATCTAAGGAGGTTTGCCTTGTAACACCAGACATCAAGAAAGGAAAGAAAGTGGATCATGAGCCTACTGTAGACAAATGGGAGGAATTGCTCCGAGGAGCCGGAGTTACCAGTGTCAAGACCATCCTCCCTATGAGGCAACTAAGAGTGGAGTATGACCAGTTTGAATTGAAGCGCAGATTGTTGACTCAACATGACTTCATAATGGTCGACACAAGAGTTCTAAACCACGTGTCTCACATCTTGGGAAAGATGTTCTTCAAGAAACACAATATGTTGATACCCGTCAAGATAGATGAAACGAAAGATGTCAAGAAAGATATTGATGTTGGCTTAAGGACTGTCATGTTGAGAATCAGTGCGGGTCAAACTACCACCATAGTTGTCGGACACACCGGCATGCAGCAGAATGATATTAAGGAAAACATTTTAGCGGTTGTCAATATGTTGAATAAGAAGTTTCCAGGCGGCGAAGCTAACATCAGAGGTCTAGCTATAAAGCTACCATTGTCACTTTCTCTGCCAATATATATGACACTGAGGCCAGGCAGTTCTGTAAAAACGGTGCCAAAACTTAAACACCCTAAGCCAAAGTCACATGTTATGTATGAGGATGAGTTATCAACTCATCTCAGGAGTACTGTGAGAGTCAATCCCGATGGAACTGTTAAATTGAAATTACAGCCACAGAAAAAAAAAGAAAGAATTGTGGAAGATGACATTCTAAGTGATGGTGATGACAATCAAGAAGATGATGAAATGGATGATGATGGTGATGAAGAATGA

Protein sequence:

>DPOGS205351-PA
MPSKAVTDEIVISALTALEKLTAHTSNKNIIFGDEHQIFMEIRCIKIPHSKGNIKFVLPHSTVLSSKEVCLVTPDIKKGKKVDHEPTVDKWEELLRGAGVTSVKTILPMRQLRVEYDQFELKRRLLTQHDFIMVDTRVLNHVSHILGKMFFKKHNMLIPVKIDETKDVKKDIDVGLRTVMLRISAGQTTTIVVGHTGMQQNDIKENILAVVNMLNKKFPGGEANIRGLAIKLPLSLSLPIYMTLRPGSSVKTVPKLKHPKPKSHVMYEDELSTHLRSTVRVNPDGTVKLKLQPQKKKERIVEDDILSDGDDNQEDDEMDDDGDEE-