| DPOGS205401 | ||
|---|---|---|
| Transcript | DPOGS205401-TA | 393 bp |
| Protein | DPOGS205401-PA | 130 aa |
| Genomic position | DPSCF300407 - 111023-112187 | |
| RNAseq coverage | 653x (Rank: top 20%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL022218 | 1e-48 | 97.80% | |
| Bombyx | BGIBMGA001406-TA | 6e-49 | 98.90% | |
| Drosophila | Cctgamma-PB | 2e-46 | 97.75% | |
| EBI UniRef50 | UniRef50_P49368 | 8e-40 | 84.62% | T-complex protein 1 subunit gamma n=209 Tax=root RepID=TCPG_HUMAN |
| NCBI RefSeq | XP_001870703.1 | 7e-46 | 96.74% | T-complex protein 1 subunit gamma [Culex quinquefasciatus] |
| NCBI nr blastp | gi|170048592 | 2e-44 | 96.74% | T-complex protein 1 subunit gamma [Culex quinquefasciatus] |
| NCBI nr blastx | gi|170048592 | 1e-41 | 96.74% | T-complex protein 1 subunit gamma [Culex quinquefasciatus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0044267 | 3.5e-67 | cellular protein metabolic process | |
| GO:0006457 | 3.5e-67 | protein folding | ||
| GO:0005524 | 3.5e-67 | ATP binding | ||
| GO:0051082 | 3.5e-67 | unfolded protein binding | ||
| KEGG pathway | ||||
| InterPro domain | [1-91] IPR002423 | 3.5e-67 | Chaperonin Cpn60/TCP-1 | |
| [1-91] IPR012719 | 3.5e-67 | T-complex protein 1, gamma subunit | ||
| [35-51] IPR017998 | 3.1e-06 | Chaperone, tailless complex polypeptide 1 | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS205401-TA
ATGTACGGACAGCAACCAATTCTTGTTTTAAGCCAAAACACAAAACGTGAGTCCGGCCGGAAAGTTCAACTTGAGAATATAAATGCTGGAAAGACGATAGCGGACGTTATTCGAACATGCCTCGGCCCACAGGCTATGTTGAAAATGCTAATGGATCCCATGGGCGGTATTGTGATGACTAACGATGGTAATGCTATACTCAGAGAAATCACTGTCCAGCATCCAGCTGCTAAATCCATGATAGAAATCGCAAGAACGCAGGATGAAGAGGTCTATAAAACGGCGGTGGAGACGGCGATATTTCTGTTAAGGATCGACGACATCGTCTCAGGGTCCAAGAAGAAGAACAAGGAAGGCGCGAACCCGGCTGAGATGGCGAACATGCAGGAATAG
>DPOGS205401-PA
MYGQQPILVLSQNTKRESGRKVQLENINAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEIARTQDEEVYKTAVETAIFLLRIDDIVSGSKKKNKEGANPAEMANMQE-