Monarch geneset OGS2.0

DPOGS205500
TranscriptDPOGS205500-TA2937 bp
ProteinDPOGS205500-PA978 aa
Genomic positionDPSCF300056 - 466290-469903
RNAseq coverage191x (Rank: top 48%)
Annotation
HeliconiusHMEL0112810.062.83% 
BombyxBGIBMGA000131-TA0.063.02% 
DrosophilaCG5660-PA0.042.34% 
EBI UniRef50UniRef50_E9HDC90.043.76%Putative uncharacterized protein n=1 Tax=Daphnia pulex RepID=E9HDC9_DAPPU
NCBI RefSeqXP_001648027.10.043.08%valyl-tRNA synthetase [Aedes aegypti]
NCBI nr blastpgi|1571035470.043.08%valyl-tRNA synthetase [Aedes aegypti]
NCBI nr blastxgi|3214592110.043.76%hypothetical protein DAPPUDRAFT_328232 [Daphnia pulex]
Group
Gene OntologyGO:00064183e-183tRNA aminoacylation for protein translation
GO:00048123e-183aminoacyl-tRNA ligase activity
GO:00055244.8e-42ATP binding
GO:00001664.8e-42nucleotide binding
GO:00057374.8e-42cytoplasm
GO:00048328.5e-32valine-tRNA ligase activity
GO:00064388.5e-32valyl-tRNA aminoacylation
KEGG pathwayaag:AaeL_AAEL0140990.0 
 K01873 (VARS, valS)maps-> Aminoacyl-tRNA biosynthesis
    Valine, leucine and isoleucine biosynthesis
InterPro domain[12-977] IPR0023030Valyl-tRNA synthetase
[39-645] IPR0023003e-183Aminoacyl-tRNA synthetase, class Ia
[632-646] IPR0147292.6e-130Rossmann-like alpha/beta/alpha sandwich fold
[231-381] IPR0090082.4e-50Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing domain
[666-941] IPR0090808.3e-37Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
[699-858] IPR0131553.5e-21Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding
Orthology groupMCL10098 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS205500-TA
ATGTTAAAGTCCGGTCAATATTTCAACAAGAGATATATTTCAAAGACAGTTAAAATAGTTGCCAAAGATATTTTACCTGCTGCAGCTTATACGCCGGATATTGTTGAAAAGAAAGTCTACGATGAATGGGAAAGGAGAGGTTTATTTAAAGCTGATAGTAAAAACGACAAAAGAAGATTCAGTATTGTTTTGCCGCCGCCAAATGTAACGGGAAAATTACACCTAGGTCATGCTCTGTCCAATACAATTCAAGATGTGATTGTGAGGCGGAAAAGATCTCAAGGATATAATGTCCTATGGCTACCGGGAACAGATCATGCGGGGATTGCCACACAGGGCGTTGTTGAAAAGTATTTGAAGACAAATCAGAATATAAATCGTCATGACATCGGTAGAGATAAATTTATCCAAGAAGTCTGGAAATGGAAAGAAGAACATGGCAACATTATATGTCAGCAGTTACGAACGATGGGCTGTTCCTTGGACTGGTCGAAAGAAATTTTTACCATGAATGAAAATCACACAAATGCTGTAAACACTGCATTTATAAGACTGTTCAAAAAAGGTTTAACATATAGAAAAAAGGCTTTAGTTAACTGGTGCAATGCTTTAAAGTCCACTTTATCTGACATAGAAGTTGAAAATATAAGTATTGACGGACCCACCGATATTAGTATACCAAGTTATGATGTGCCCGTCAAATTTGGTCTGATTTATAATATCTCATATAAATTGATAGATAGCAATGAAGAAGTTATCGTGTCTACAACTACGCCGGAAACAATATTAGGTGACACAGCCATAGCAGTCAATCCTAGAGATGAAAGGTACAGCCACCTTAAAGGCAGGAGAGCAGTACACCCGTTCAGGAAAACGACAATACCAATAATATTGGACAATTTCGTGGACATGAAACTCGGCACCGGCGCCGTTAAAATAACCCCAGCCCACAGCAAAGTAGACTACGAAGTAGCTAAGCATCACAACTTGGAAATGATCCAAGTTATTGACGAGAACGGCAGAATACAAAATGGCGGAGAATTCGATGGCATGAAGAAATACGAGGGTAGAGAGGAAATTGTTACCGCCTTACAAGTATTGGGACTCCTAAAATCTATTGACACGCATCAGATGACTTTACCAATATGCAGCAGAAGCGGTGATGTTATCGAGTATCTACCTAAGGAGCAGTGGTTTTTGTCGTGTAGCAAACTCAATAAAAGAGCCATAGAAGTGGTTAGAGACAAAAAAATTACCATGGATCCCGAGAGATACGTGAAAAACTGGCTAAATTGGGCCGAAGATGACAAAGATTGGTGCATATCGAGACAATTGTGGTGGGGGCACCAAATACCAGCATATAAATGTAGCTTAGGTGAAGATCTCATATGGATAGCAGCTGTTGATAGCGAGACTGCTAAAATAGAAGCCTCCAAATATCTAAGGGTCCTTCCAGACGATATCACAGTGAGTAGAGATCAGGACGTTCTCGATACTTGGTTCTCATCTGGTATTTATCCATTCGCGGCCTTAGGTTGGCCGGAAAACAACATCGACTTACACAAATTTTACCCTTTGGATTTAATGGTGACAGGTCATGACATACTCGGGTTCTGGGTGCACAGAATGGTGATACTAGGACTAGAATTAACCGGACAACTGCCATTCGACAATGTTCTTTTGCATGGGGTTATATGTGATAGTAAAGGGGCGAAAATGTCCAAGAGCAAAGGCAACATCATCGATCCCATCGACGTAATAAACGGAATATCCATGGAAGGTCTGAAGGAGAAGGTGGAAAACATGCAGAAAGATGGTCTTCTAACGAAAGACGAAGTCAAAAGATCTATATCATATCACAGAACGAATTTCTCAAACACCAATGGCATCCCAGAATGCGGAGTGGACGCGTTACGTTTCACTCTCCTCACACAAGACATAAAATCAAACTTCGTCAGCTTCGATGTAAACCAATGCCACGCAAACAAATTATTCTGCAATAAAATTTGGCAAAGCGTCAAATATGTCAGGCTTTCAATGGAAAAACTGAAATTTATGGATGATGAAATAACGAAAGACGATTTAAATTCGTTCGACAGATGGATTCTCAGCAAACTGTCGGACATGGTTGCTGGTGTTAACAAATCGATTGACGATAATAACTTTCACATCGCAACGAAATGTTTAAAAACATTGATATACAGTCAATTCTGTGATGTTTATTTGGAGAGCACCAAGCCGGGTTTCGATGGTGGCGATGAGAAAACTGGATATGCGCATGCGCACACCCTGTCCGCTGTTTTAAACACATCCCTACGATGTTTGTCACCTTTCATGATATACATCACACATGAACTTATACCAAAAATACCTAACTTTGAAACCAACGTAATATATAATTTCGATGATGATGATGATAATTTCTTTAAATTTCCCAAATATGAAGACTTTCAGGTTTGGAAAAACGTTCACGTCGAAAATAGAATAGACAGAGTCATTGATGCGGTTATATTGACGAGGGAACTTAAAGGATTCTACAATATAACCAACAAGTTAAAACCCACTGTATATATCAACACCACAGACGAATCCTTGTTACATGATATAAAAAATAATATTGACATAGTACGACATTTATCAAAAACTAGTGACGTCAGAATTAATGAGGAAATTAAAAATAATGTTGTGAGCAGTAACATGGATGGCAACACAGAGGTTGGTGTGGGAATCGTTGGTGATAAATCCGAAGATATTATCTCAGCGGCTAAGGAGAAACTTCAAAAGAGGATAAAAAAATTAGAAGACAGTTTGTCCAAACTAGAAATGAAATTATCTAGTAGCCATTATGTGAAAACGGTCCCGGAACACAAGCTGACCATAGACAAACAGAAAGTTACACTACAGAGAGATGAATTGAAAAGACTACAGAGATTATAA

Protein sequence:

>DPOGS205500-PA
MLKSGQYFNKRYISKTVKIVAKDILPAAAYTPDIVEKKVYDEWERRGLFKADSKNDKRRFSIVLPPPNVTGKLHLGHALSNTIQDVIVRRKRSQGYNVLWLPGTDHAGIATQGVVEKYLKTNQNINRHDIGRDKFIQEVWKWKEEHGNIICQQLRTMGCSLDWSKEIFTMNENHTNAVNTAFIRLFKKGLTYRKKALVNWCNALKSTLSDIEVENISIDGPTDISIPSYDVPVKFGLIYNISYKLIDSNEEVIVSTTTPETILGDTAIAVNPRDERYSHLKGRRAVHPFRKTTIPIILDNFVDMKLGTGAVKITPAHSKVDYEVAKHHNLEMIQVIDENGRIQNGGEFDGMKKYEGREEIVTALQVLGLLKSIDTHQMTLPICSRSGDVIEYLPKEQWFLSCSKLNKRAIEVVRDKKITMDPERYVKNWLNWAEDDKDWCISRQLWWGHQIPAYKCSLGEDLIWIAAVDSETAKIEASKYLRVLPDDITVSRDQDVLDTWFSSGIYPFAALGWPENNIDLHKFYPLDLMVTGHDILGFWVHRMVILGLELTGQLPFDNVLLHGVICDSKGAKMSKSKGNIIDPIDVINGISMEGLKEKVENMQKDGLLTKDEVKRSISYHRTNFSNTNGIPECGVDALRFTLLTQDIKSNFVSFDVNQCHANKLFCNKIWQSVKYVRLSMEKLKFMDDEITKDDLNSFDRWILSKLSDMVAGVNKSIDDNNFHIATKCLKTLIYSQFCDVYLESTKPGFDGGDEKTGYAHAHTLSAVLNTSLRCLSPFMIYITHELIPKIPNFETNVIYNFDDDDDNFFKFPKYEDFQVWKNVHVENRIDRVIDAVILTRELKGFYNITNKLKPTVYINTTDESLLHDIKNNIDIVRHLSKTSDVRINEEIKNNVVSSNMDGNTEVGVGIVGDKSEDIISAAKEKLQKRIKKLEDSLSKLEMKLSSSHYVKTVPEHKLTIDKQKVTLQRDELKRLQRL-