DPOGS205529 | ||
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Transcript | DPOGS205529-TA | 360 bp |
Protein | DPOGS205529-PA | 119 aa |
Genomic position | DPSCF300056 + 177841-178200 | |
RNAseq coverage | 361x (Rank: top 33%) |
Annotation | ||||
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Heliconius | HMEL011298 | 3e-56 | 89.92% |   |
Bombyx | BGIBMGA000081-TA | 5e-52 | 84.03% |   |
Drosophila | Chrac-14-PB | 1e-17 | 44.09% |   |
EBI UniRef50 | UniRef50_E2AN99 | 4e-32 | 62.14% | DNA polymerase epsilon subunit 3 n=5 Tax=Endopterygota RepID=E2AN99_CAMFO |
NCBI RefSeq | XP_001122640.1 | 3e-31 | 60.19% | PREDICTED: similar to polymerase (DNA directed), epsilon 3 (p17 subunit) [Apis mellifera] |
NCBI nr blastp | gi|307174746 | 2e-31 | 62.14% | DNA polymerase epsilon subunit 3 [Camponotus floridanus] |
NCBI nr blastx | gi|307201447 | 1e-33 | 59.66% | DNA polymerase epsilon subunit 3 [Harpegnathos saltator] |
Group | ||||
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Gene Ontology | GO:0003677 | 3.4e-34 | DNA binding | |
GO:0043565 | 8e-14 | sequence-specific DNA binding | ||
GO:0005622 | 8e-14 | intracellular | ||
KEGG pathway | ame:726923 | 1e-30 |   | |
  | K02326 (POLE3) | maps-> | Purine metabolism | |
  |   |   | Base excision repair | |
  |   |   | DNA replication | |
  |   |   | Nucleotide excision repair | |
  |   |   | Pyrimidine metabolism | |
InterPro domain | [2-114] IPR009072 | 3.4e-34 | Histone-fold | |
[9-73] IPR003958 | 8e-14 | Transcription factor CBF/NF-Y/archaeal histone | ||
Orthology group | MCL12235 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS205529-TA
ATGGCTGAAAAACTCGAGGACCTCAACCTCCCACTTACTGTGGTTACTAGAATTGTCAAAGAAGCCCTGCCTGACGGTGTAGCGATATCAAAAGAAGCTAGAACCGGTCTCGCTAAAGCCGCTTCGGTTTTCGTTTTATATGTAACCTCAGCAGCGACGAATATAGTAAAAAACAACAAAAGAAAAGCATTAACTGGCCAGGACGTGTTGGAAGCGATGGCAGACATTGAATTCGATCGGTTTGTAGAACCATTGAAAGAAGCGTTAGAACAATATAAGCAAGTGGCATTTGCGAAAAAACAAGCTTCGGGGAAGAAAAAGGATGAGACTGAAGATGTGGAAATGGCTGAAGATGAATAA
>DPOGS205529-PA
MAEKLEDLNLPLTVVTRIVKEALPDGVAISKEARTGLAKAASVFVLYVTSAATNIVKNNKRKALTGQDVLEAMADIEFDRFVEPLKEALEQYKQVAFAKKQASGKKKDETEDVEMAEDE-