DPOGS205578 | ||
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Transcript | DPOGS205578-TA | 552 bp |
Protein | DPOGS205578-PA | 183 aa |
Genomic position | DPSCF300237 - 354718-358598 | |
RNAseq coverage | 904x (Rank: top 14%) |
Annotation | ||||
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Heliconius | HMEL008497 | 1e-32 | 50.29% |   |
Bombyx | BGIBMGA009760-TA | 6e-89 | 86.03% |   |
Drosophila | zetaCOP-PA | 7e-76 | 75.45% |   |
EBI UniRef50 | UniRef50_Q16K40 | 1e-79 | 78.49% | Zeta-coat protein n=7 Tax=Opisthokonta RepID=Q16K40_AEDAE |
NCBI RefSeq | NP_001040202.1 | 1e-90 | 88.20% | nonclathrin coat protein zeta 1-COP [Bombyx mori] |
NCBI nr blastp | gi|284027830 | 9e-95 | 90.71% | coatomer protein complex subunit zeta [Bombyx mori] |
NCBI nr blastx | gi|284027830 | 5e-90 | 90.71% | coatomer protein complex subunit zeta [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0006810 | 1.2e-27 | transport | |
KEGG pathway |   | |||
InterPro domain | [17-156] IPR011012 | 1.2e-27 | Longin-like | |
[18-156] IPR022775 | 1.4e-27 | AP complex, mu/sigma subunit | ||
Orthology group | MCL13899 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS205578-TA
ATGGTTCACACTAATTTAGAAGGATCTCTGTTTGAGCCGACGCTATACATTGTCAAAGGTATGTGTATACTTGACAATGAGGGCAACAGAATCCTTGCCAAGTACTATGATAAAGACATTCTACCGACACCCAAAGAGCAGAAGGCGTTCGAAAAGAACTTGTTCAACAAAACCCATAGGGCCAATGCTGAAATCATCATGCTGGATGGCCTAACTTGTGTATACAAGAGTAATGTGGACCTATTCTTCTATGTCATGGGGAGTTCACATGAGAATGAGTTATTGCTCCAATCAGTTCTAAACTCCCTTTATGAGTCAGTCAGTATACTTCTCCGTCGGAATGTTGAGAAAAGAGTTCTTATGGACAATCTGGATTCCGTGATGCTCGCTTTCGATGAGATCTGTGATGGCGGGGTGATTCTTGACTCAGATCCTGGTTCTATAGTTGGCAGAGCTGCCTTGAGAGGTGAAGATGTACCGCTCGGAGAGCAGACCGTTGTTCAGGTGTTACAATCAGCGAGGGAGCAACTCAAGTGGTCGCTGTTGAAGTGA
>DPOGS205578-PA
MVHTNLEGSLFEPTLYIVKGMCILDNEGNRILAKYYDKDILPTPKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYKSNVDLFFYVMGSSHENELLLQSVLNSLYESVSILLRRNVEKRVLMDNLDSVMLAFDEICDGGVILDSDPGSIVGRAALRGEDVPLGEQTVVQVLQSAREQLKWSLLK-