| DPOGS205639 | ||
|---|---|---|
| Transcript | DPOGS205639-TA | 708 bp |
| Protein | DPOGS205639-PA | 235 aa |
| Genomic position | DPSCF300023 - 183088-183968 | |
| RNAseq coverage | 42x (Rank: top 72%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006592 | 5e-110 | 87.88% | |
| Bombyx | BGIBMGA001148-TA | 2e-107 | 86.70% | |
| Drosophila | ac-PA | 2e-21 | 63.41% | |
| EBI UniRef50 | UniRef50_A6N868 | 4e-32 | 60.59% | Achaete-scute-like protein ASH3 n=4 Tax=Obtectomera RepID=A6N868_BOMMO |
| NCBI RefSeq | NP_001098692.1 | 5e-106 | 86.70% | achaete-scute-like protein ASH2 [Bombyx mori] |
| NCBI nr blastp | gi|3265156 | 4e-110 | 89.66% | achaete-scute homolog ASH1 [Junonia coenia] |
| NCBI nr blastx | gi|3265156 | 2e-111 | 89.66% | achaete-scute homolog ASH1 [Junonia coenia] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 1.4e-32 | DNA binding | |
| GO:0005634 | 3.3e-21 | nucleus | ||
| GO:0006355 | 3.3e-21 | regulation of transcription, DNA-dependent | ||
| KEGG pathway | ||||
| InterPro domain | [65-145] IPR015660 | 1.4e-32 | Achaete-scute transcription factor-related | |
| [71-141] IPR011598 | 3.3e-21 | Helix-loop-helix DNA-binding | ||
| [79-142] IPR001092 | 4.1e-20 | Helix-loop-helix DNA-binding domain | ||
| Orthology group | MCL26615 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS205639-TA
ATGTTACAAGAAATACAACTCGTTCAAGGTCAGACCAACTATATGGTCGTCTCTTCGGGCTATCCTACGTCTACTGTCACCAAGAATACAGAAAAAAGGATTCTACCGATTTCTACAGGTGCTGAAAAAAATTATGTAACACACGATACTCCTCCAAACCTGCAGTACAGAAAAAAAGTGCACTTTAGGACTAATCCATACACAGGACCTCAAGCTGTTTCAATTGCTAGACGCAATGCTAGAGAACGTAACCGTGTGAAACAAGTTAATGATGGATTTAATGCACTACGCCGACATCTTCCGGCCTCAGTGGTAGCGGCACTATCAGGTGGAGCTAGACGAGGTTCAGGGAAGAAACTGAGTAAAGTGGACACATTGAGAATGGTCGTGGAATATATAAGATATTTACAGCAATTGCTTGATGAAAGCGATGCGGCTTTGGGCATTACACGCGACCAGGAAAATAGAGAAAATATACCAAGTGGTAATCAAACTATGACTGTGTCAGATATGGACGATGGCTTCTTTTACGGAAGTGGGTCACCTTGTTCTGAAAAAGCCGATTCCCCAGCACCTTCAGAATGCTCATCTGGTGTTTCATCAGCGTATTCCAACGTGGATAGGTACGAGGTATCAACACAACAACCTTTGGGCCCAATGGATGAGGATGAACTTCTAGATGTACTGATGCACCGAAACACGTTTTGA
>DPOGS205639-PA
MLQEIQLVQGQTNYMVVSSGYPTSTVTKNTEKRILPISTGAEKNYVTHDTPPNLQYRKKVHFRTNPYTGPQAVSIARRNARERNRVKQVNDGFNALRRHLPASVVAALSGGARRGSGKKLSKVDTLRMVVEYIRYLQQLLDESDAALGITRDQENRENIPSGNQTMTVSDMDDGFFYGSGSPCSEKADSPAPSECSSGVSSAYSNVDRYEVSTQQPLGPMDEDELLDVLMHRNTF-