DPOGS205650 | ||
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Transcript | DPOGS205650-TA | 597 bp |
Protein | DPOGS205650-PA | 198 aa |
Genomic position | DPSCF300023 + 164799-165395 | |
RNAseq coverage | 9x (Rank: top 85%) |
Annotation | ||||
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Heliconius | HMEL004170 | 5e-61 | 69.42% |   |
Bombyx | BGIBMGA001000-TA | 9e-47 | 64.40% |   |
Drosophila | sc-PA | 1e-19 | 54.67% |   |
EBI UniRef50 | UniRef50_A6N868 | 1e-47 | 63.11% | Achaete-scute-like protein ASH3 n=4 Tax=Obtectomera RepID=A6N868_BOMMO |
NCBI RefSeq | NP_001098694.1 | 3e-48 | 63.11% | achaete-scute-like protein ASH3 [Bombyx mori] |
NCBI nr blastp | gi|157412306 | 5e-47 | 63.11% | achaete-scute-like protein ASH3 [Bombyx mori] |
NCBI nr blastx | gi|157412306 | 2e-58 | 64.04% | achaete-scute-like protein ASH3 [Bombyx mori] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0003677 | 4.1e-30 | DNA binding | |
GO:0005634 | 2.6e-20 | nucleus | ||
GO:0006355 | 2.6e-20 | regulation of transcription, DNA-dependent | ||
KEGG pathway |   | |||
InterPro domain | [36-118] IPR015660 | 4.1e-30 | Achaete-scute transcription factor-related | |
[39-114] IPR011598 | 2.6e-20 | Helix-loop-helix DNA-binding | ||
[52-115] IPR001092 | 1.6e-18 | Helix-loop-helix DNA-binding domain | ||
Orthology group | MCL26616 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS205650-TA
ATGATTCAAACCAAGAACTATACTGGCTTTTACAATAACGAGATCCCAAAATTCGTTCCAATCGCTCCCATGGTGGATCAAGAAATGGATTGCACAGTGCGAAAATACAATTACAAAAATAATTCCGGACAAGCAGCATCTATTGCGAGGCGCAATGCAAGAGAGAGGAATCGCGTTAAACAAGTTAATGATGGTTTTAACGCTTTAAGAAAAAGATTACCCGCTGCCGTTGTGAATGCATTGTCTGGAGGCGCTCGTCGGGGATCCGGCAAGAAATTGAGCAAAGTCGATACATTACGAATGGTGGTTGAGTACATTAAATATTTGGAGAATTTAATCGACGAAAGTGATGCTTCATTGGGTGTTACCAAAGAACCTATGGATACATCTGGAATTGATGAGGGAATTTTTGGAAGAACATCACCGTACTCTGACTCTGTACCATCGCCTGCTAACTCTGAATGTTCATCGGGGGTGTCTTCAAGCTATTCAAATGATCATTACCAAATTAACACTCACAACAATTACTATAGTGAAGTAAACGCAGTAAATGATAGTGAATTATTAGATGCGATCACTTGGTGGCAGCAAAAGTAA
>DPOGS205650-PA
MIQTKNYTGFYNNEIPKFVPIAPMVDQEMDCTVRKYNYKNNSGQAASIARRNARERNRVKQVNDGFNALRKRLPAAVVNALSGGARRGSGKKLSKVDTLRMVVEYIKYLENLIDESDASLGVTKEPMDTSGIDEGIFGRTSPYSDSVPSPANSECSSGVSSSYSNDHYQINTHNNYYSEVNAVNDSELLDAITWWQQK-