| DPOGS205732 | ||
|---|---|---|
| Transcript | DPOGS205732-TA | 567 bp |
| Protein | DPOGS205732-PA | 188 aa |
| Genomic position | DPSCF300342 - 98893-106105 | |
| RNAseq coverage | 7505x (Rank: top 2%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006584 | 2e-41 | 50.89% | |
| Bombyx | BGIBMGA007092-TA | 9e-89 | 87.72% | |
| Drosophila | Chd64-PB | 6e-93 | 84.04% | |
| EBI UniRef50 | UniRef50_Q9VZI1 | 6e-91 | 84.04% | Calponin-like protein Chd64 n=29 Tax=Bilateria RepID=Q9VZI1_DROME |
| NCBI RefSeq | NP_001040372.1 | 3e-97 | 88.83% | transgelin [Bombyx mori] |
| NCBI nr blastp | gi|114051357 | 5e-96 | 88.83% | transgelin [Bombyx mori] |
| NCBI nr blastx | gi|114051357 | 1e-92 | 88.83% | transgelin [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 1.2e-56 | protein binding | |
| KEGG pathway | ngr:NAEGRDRAFT_79690 | 3e-12 | ||
| K05767 (IQGAP) | maps-> | Regulation of actin cytoskeleton | ||
| InterPro domain | [17-175] IPR001715 | 1.2e-56 | Calponin homology domain | |
| [4-18] IPR003096 | 4e-31 | Smooth muscle protein/calponin | ||
| Orthology group | MCL15061 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS205732-TA
ATGGCCAACAACAGGGCCGCGAAGTCTGGATTTGCTGCTGAGGCGCAAAGAAAGATTAACAGCAAATACAGCGAGGAGTTGGCCGAGGAGTGCCTGGAATGGATCCGACAAATCATCGGCGAGCCTGACAATACTTCAGGTGATATGGACAACTTCTACGAAGTACTTAAAGACGGCGTCGTTCTATGCAAACTGGCAAATAACCTTCAACCGGGGACCGTAAAAAAAGTCAATGAGTCCAAGATGGCATTCAAGTGCATGGAGAACATCAACGCCTTCCTGGAGGCCGCCAAGCAATTCGGAGTCCCCGCCCAAGAAACATTCCAAACAGTCGACCTTTGGGAGAGACAAAACCTCAACTCTGTTGTCATTTGTCTCCAGTCACTCGGCAGAAAGGCTGGCAACTACGGTAAACCTTCAATAGGGCCGAAAGAAGCGGAAAAGAACGTACGAAACTTTACCGAGGAACAGCTAAGAGCTGGTCAGGGTGTGATTTCCTTGCAATATGGATCCAACAAGGGTGCCACCCAAAGCGGCATCAACTTTGGGAACACACGGCATATGTAA
>DPOGS205732-PA
MANNRAAKSGFAAEAQRKINSKYSEELAEECLEWIRQIIGEPDNTSGDMDNFYEVLKDGVVLCKLANNLQPGTVKKVNESKMAFKCMENINAFLEAAKQFGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGNYGKPSIGPKEAEKNVRNFTEEQLRAGQGVISLQYGSNKGATQSGINFGNTRHM-