| DPOGS205849 | ||
|---|---|---|
| Transcript | DPOGS205849-TA | 783 bp |
| Protein | DPOGS205849-PA | 260 aa |
| Genomic position | DPSCF300081 + 191901-193612 | |
| RNAseq coverage | 1075x (Rank: top 12%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL017388 | 2e-115 | 81.15% | |
| Bombyx | BGIBMGA010906-TA | 8e-151 | 97.31% | |
| Drosophila | mus209-PA | 3e-127 | 80.77% | |
| EBI UniRef50 | UniRef50_P17917 | 5e-125 | 80.77% | Proliferating cell nuclear antigen n=205 Tax=Eukaryota RepID=PCNA_DROME |
| NCBI RefSeq | NP_001036825.1 | 1e-146 | 96.15% | proliferating cell nuclear antigen [Bombyx mori] |
| NCBI nr blastp | gi|21717394 | 1e-148 | 97.69% | proliferating cell nuclear antigen [Spodoptera frugiperda] |
| NCBI nr blastx | gi|21717394 | 3e-141 | 97.69% | proliferating cell nuclear antigen [Spodoptera frugiperda] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 4.8e-192 | DNA binding | |
| GO:0043626 | 4.8e-192 | PCNA complex | ||
| GO:0006275 | 4.8e-192 | regulation of DNA replication | ||
| GO:0030337 | 4.8e-192 | DNA polymerase processivity factor activity | ||
| KEGG pathway | aag:AaeL_AAEL012545 | 1e-129 | ||
| K04802 (PCNA) | maps-> | Base excision repair | ||
| DNA replication | ||||
| Mismatch repair | ||||
| Nucleotide excision repair | ||||
| Cell cycle | ||||
| InterPro domain | [1-259] IPR000730 | 4.8e-192 | Proliferating cell nuclear antigen, PCNA | |
| [127-254] IPR022649 | 2e-63 | Proliferating cell nuclear antigen, PCNA, C-terminal | ||
| [1-125] IPR022648 | 6.1e-60 | Proliferating cell nuclear antigen, PCNA, N-terminal | ||
| Orthology group | MCL13126 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS205849-TA
ATGTTCGAAGCACGACTTCTCCGTAGCTCTATCCTGAAGAAAGTACTGGAGGCAATCAAGGATCTCCTTACTCAGGCAACTTTTGACTGTGATGATAATGGTATACAGTTGCAGGCTATGGACAATTCACATGTGTCTCTTGTATCACTCACCCTGAGAGCCGATGGATTTGATAAATACAGATGTGATAGAAACATCTCAATGGGAATGAATCTCGGCAGTATGTCTAAGATCCTAAAATGTGCTGGTGACAAGGACACTGTAACAATGAAAGCGCAAGATAATGCCGACACAGTCACCTTTGTGTTTGAGAGCCCTAACCAGGAAAAGGTTTCCGATTACGAAATGAAGCTCATGAATTTGGATTTAGAACATTTGGGCATCCCAGAGACAGAATACAGTTGCACAATTCGAATGCCAAGCGGTGAATTCGCAAGGATTTGTCGTGATCTATCACAGTTCGGCGAATCTATGGTGATATCTTGTACTAAGGAAGGAGTAAAGTTTTCAGCGAGTGGTGACATCGGCTCGGCAAATATAAAGCTGGCTCAAACAGCATCTATTGATAAGGAAGAAGAAGCCGTTGTTATTGAGATGGATGAACCAGTCACACTCACCTTCGCCTGTCAGTATCTTAACTACTTCACTAAAGCCACTTCATTGAGTCCTCAGGTACAGTTGTCGATGTCAGCGGATGTCCCCCTGGTGGTGGAGTACCGCATCCCGGACATAGGTCACATACGTTACTACCTCGCACCCAAGATAGAAGAAGACGACAGCTAG
>DPOGS205849-PA
MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSGEFARICRDLSQFGESMVISCTKEGVKFSASGDIGSANIKLAQTASIDKEEEAVVIEMDEPVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEDDS-