| DPOGS205889 | ||
|---|---|---|
| Transcript | DPOGS205889-TA | 1086 bp |
| Protein | DPOGS205889-PA | 361 aa |
| Genomic position | DPSCF300089 - 427884-432216 | |
| RNAseq coverage | 1x (Rank: top 93%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005571 | 8e-131 | 98.19% | |
| Bombyx | BGIBMGA007021-TA | 4e-123 | 93.64% | |
| Drosophila | Rab40-PB | 4e-88 | 77.89% | |
| EBI UniRef50 | UniRef50_Q7Q4W5 | 1e-88 | 83.52% | AGAP000841-PA n=2 Tax=Anopheles gambiae RepID=Q7Q4W5_ANOGA |
| NCBI RefSeq | XP_397266.3 | 5e-96 | 91.67% | PREDICTED: similar to Rab40 CG1900-PA, isoform A [Apis mellifera] |
| NCBI nr blastp | gi|307694589 | 3e-121 | 94.57% | Rab40 [Biston betularia] |
| NCBI nr blastx | gi|307694589 | 2e-115 | 94.57% | Rab40 [Biston betularia] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0007264 | 1.3e-61 | small GTPase mediated signal transduction | |
| GO:0005525 | 1.3e-61 | GTP binding | ||
| GO:0015031 | 1.3e-61 | protein transport | ||
| GO:0003824 | 1.6e-48 | catalytic activity | ||
| GO:0030170 | 1.6e-48 | pyridoxal phosphate binding | ||
| GO:0006563 | 1.2e-31 | L-serine metabolic process | ||
| GO:0004372 | 1.2e-31 | glycine hydroxymethyltransferase activity | ||
| GO:0006544 | 1.2e-31 | glycine metabolic process | ||
| GO:0016020 | 1.7e-09 | membrane | ||
| GO:0007165 | 1.7e-09 | signal transduction | ||
| GO:0006184 | 1.7e-09 | GTP catabolic process | ||
| GO:0003924 | 1.7e-09 | GTPase activity | ||
| GO:0005622 | 3.1e-09 | intracellular | ||
| KEGG pathway | ||||
| InterPro domain | [48-208] IPR003579 | 1.3e-61 | Small GTPase superfamily, Rab type | |
| [221-357] IPR015422 | 1.6e-48 | Pyridoxal phosphate-dependent transferase, major region, subdomain 2 | ||
| [219-361] IPR015424 | 2.2e-38 | Pyridoxal phosphate-dependent transferase, major domain | ||
| [49-205] IPR001806 | 4.1e-36 | Small GTPase superfamily | ||
| [219-304] IPR001085 | 1.2e-31 | Serine hydroxymethyltransferase | ||
| [47-187] IPR005225 | 1.1e-17 | Small GTP-binding protein domain | ||
| [45-208] IPR020849 | 1.7e-09 | Small GTPase superfamily, Ras type | ||
| [50-208] IPR003578 | 3.1e-09 | Small GTPase superfamily, Rho type | ||
| Orthology group | MCL12395 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS205889-TA
ATGTTCACCACGACTGGGATGGTAGCAGCACCTCAACAGGCGACAGGTCAAGTCGCACAAAATGGAAGCACTACCCTGCCGCGGTCTTATCACCAAAGAGCAGGCAGACCACCGGCAGCTCCAAAATCATATGACTATTTGTTAAAAGTATTGCTTGTGGGTGACTCAGATGTGGGGAAACAAGAAATATTACAAGACTTAGAAGATGGCTCTGCTGATTCCCCTTTTTGTAGTGGAAGTGTATATAAGACCACAACCATCCTCCTTGATGGTAAGCGTGTGAAGTTGCAGCTGTGGGATACATCGGGCCAGGGCCGGTTCTGTACGATCATCAGATCATACTCAAGAGGAGCTCAAGGCATCTTACTGGTGTACGATATTACCAACAAGTGGTCCTTTGACAGTATAGATCGCTGGTTGGAGGAGGTTGAAAAGCATGCGCCCGGAGTTCCAAAAGTACTGGTTGGTAACAGGCTTCATTTGGCCTTCAAGCGTCAAGTGCAAGAACGTGATGCTGAATTGTATGCAGCCAAGAACCATATGGCTTTCTTTGAAGTGAGCCCGCTGTGTGATTTCAATATACGTGAGAGTTTCTGTGAGCTGTCACGGATGGCACTACATCGGAACGGCATGGAAAGACTGTGGAGAAGCAATAAAGGTCTTAAGTCCAGAGGTTACAACATAGCCACAGGCGGTACAGATTTACATTTAGCACTGGTTGATGTACGTAATAAAGGTCTGTCAGGAGCAAGAGCTGAACGCATACTGGAACTATGTAGTATAGCTTGTAACAAAAATACCGTGCCAGGAGATAAGAGTGCTCTTAATCCCAGTGGGATACGCCTTGGCACACCGGCACTAACTACTAGAGGTCTAAAAGAATCTGACTTTGATAAGGTCGTTGATTACATTGACAAAGCACTCTCATTGGCTCAAGAAATAACTAAATCATCTGGACCAAAACTTGTTGATTTCAACAAATTCATTGAAGATAATGCTGATATTAAAGCAAAAATAAACAATCTCAAGGAGGAAGTAGAAAAATACAGCCAGTCATTCCCTCTACCCGGTCTAGAAAGATTTTGA
>DPOGS205889-PA
MFTTTGMVAAPQQATGQVAQNGSTTLPRSYHQRAGRPPAAPKSYDYLLKVLLVGDSDVGKQEILQDLEDGSADSPFCSGSVYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDSIDRWLEEVEKHAPGVPKVLVGNRLHLAFKRQVQERDAELYAAKNHMAFFEVSPLCDFNIRESFCELSRMALHRNGMERLWRSNKGLKSRGYNIATGGTDLHLALVDVRNKGLSGARAERILELCSIACNKNTVPGDKSALNPSGIRLGTPALTTRGLKESDFDKVVDYIDKALSLAQEITKSSGPKLVDFNKFIEDNADIKAKINNLKEEVEKYSQSFPLPGLERF-