DPOGS205890 | ||
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Transcript | DPOGS205890-TA | 870 bp |
Protein | DPOGS205890-PA | 289 aa |
Genomic position | DPSCF300089 - 421532-424927 | |
RNAseq coverage | 94x (Rank: top 62%) |
Annotation | ||||
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Heliconius | HMEL005571 | 2e-155 | 92.76% |   |
Bombyx | BGIBMGA007021-TA | 6e-123 | 93.64% |   |
Drosophila | Rab40-PB | 4e-106 | 70.88% |   |
EBI UniRef50 | UniRef50_Q7Q4W5 | 9e-105 | 79.28% | AGAP000841-PA n=2 Tax=Anopheles gambiae RepID=Q7Q4W5_ANOGA |
NCBI RefSeq | XP_397266.3 | 8e-116 | 73.31% | PREDICTED: similar to Rab40 CG1900-PA, isoform A [Apis mellifera] |
NCBI nr blastp | gi|307694589 | 9e-159 | 93.43% | Rab40 [Biston betularia] |
NCBI nr blastx | gi|307694589 | 4e-153 | 93.43% | Rab40 [Biston betularia] |
Group | ||||
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Gene Ontology | GO:0007264 | 1.3e-61 | small GTPase mediated signal transduction | |
GO:0005525 | 1.3e-61 | GTP binding | ||
GO:0015031 | 1.3e-61 | protein transport | ||
GO:0035556 | 9.3e-13 | intracellular signal transduction | ||
GO:0016020 | 1.7e-09 | membrane | ||
GO:0007165 | 1.7e-09 | signal transduction | ||
GO:0006184 | 1.7e-09 | GTP catabolic process | ||
GO:0003924 | 1.7e-09 | GTPase activity | ||
GO:0005622 | 3.1e-09 | intracellular | ||
KEGG pathway |   | |||
InterPro domain | [48-208] IPR003579 | 1.3e-61 | Small GTPase superfamily, Rab type | |
[49-205] IPR001806 | 2.3e-36 | Small GTPase superfamily | ||
[47-187] IPR005225 | 6.3e-18 | Small GTP-binding protein domain | ||
[214-257] IPR001496 | 9.3e-13 | SOCS protein, C-terminal | ||
[45-208] IPR020849 | 1.7e-09 | Small GTPase superfamily, Ras type | ||
[50-208] IPR003578 | 3.1e-09 | Small GTPase superfamily, Rho type | ||
Orthology group | MCL12395 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS205890-TA
ATGTTCACCACGACTGGGATGGTAGCAGCACCTCAACAGGCGACAGGTCAAGTCGCACAAAATGGAAGCACTACCCTGCCGCGGTCTTATCACCAAAGAGCAGGCAGACCACCGGCAGCTCCAAAATCATATGACTATTTGTTAAAAGTATTGCTTGTGGGTGACTCAGATGTGGGGAAACAAGAAATATTACAAGACTTAGAAGATGGCTCTGCTGATTCCCCTTTTTGTAGTGGAAGTGTATATAAGACCACAACCATCCTCCTTGATGGTAAGCGTGTGAAGTTGCAGCTGTGGGATACATCGGGCCAGGGCCGGTTCTGTACGATCATCAGATCATACTCAAGAGGAGCTCAAGGCATCTTACTGGTGTACGATATTACCAACAAGTGGTCCTTTGACAGTATAGATCGCTGGTTGGAGGAGGTTGAAAAGCATGCACCCGGAGTTCCAAAAGTACTGGTTGGTAACAGGCTTCATTTGGCCTTCAAGCGCCAAGTGCAAGAACGTGATGCTGAATTGTATGCAGCCAAGAACCATATGGCCTTCTTTGAAGTGAGCCCGCTGTGTGATTTCAATATACGTGAGAGTTTCTGTGAGCTATCACGGATGGCACTACATCGGAACGGCATGGAAAGACTGTGGAGAAGCAATAAAGTACTAAGTCTCCAAGAGCTGTGCTGTCGAGCGATAGTCGCTCGGACGTCCGTCTACGGCCTCGAGCGGCTGCCCTTGCCGAGCGCTTTGAAATCACACCTCAAGTCATACGCGATATCCGCCGCACCCAGCCGCCACCGCGCCCGCCCCTCCAAACACACCCACCACACACGACTCAACTGCACTGGCAGGAACTCTTGCTCAATCGCCTGA
>DPOGS205890-PA
MFTTTGMVAAPQQATGQVAQNGSTTLPRSYHQRAGRPPAAPKSYDYLLKVLLVGDSDVGKQEILQDLEDGSADSPFCSGSVYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDSIDRWLEEVEKHAPGVPKVLVGNRLHLAFKRQVQERDAELYAAKNHMAFFEVSPLCDFNIRESFCELSRMALHRNGMERLWRSNKVLSLQELCCRAIVARTSVYGLERLPLPSALKSHLKSYAISAAPSRHRARPSKHTHHTRLNCTGRNSCSIA-