MonarchBase - Protein-coding gene

DPOGS205936
Transcript	DPOGS205936-TA	1170 bp
Protein	DPOGS205936-PA	389 aa
Genomic position	DPSCF300156 - 210407-213372
RNAseq coverage	852x (Rank: top 15%)

Annotation
*Heliconius*	HMEL008160	3e-100	52.58%
*Bombyx*	BGIBMGA002869-TA	2e-60	37.25%
*Drosophila*	Myd88-PA	2e-29	29.29%
EBI UniRef50	UniRef50_E0VZM0	1e-38	36.17%	Myeloid differentiation primary response protein MyD88, putative n=1 Tax=Pediculus humanus corporis RepID=E0VZM0_PEDHC
NCBI RefSeq	XP_002431564.1	2e-39	36.17%	Myeloid differentiation primary response protein MyD88, putative [Pediculus humanus corporis]
NCBI nr blastp	gi\|242022271	4e-38	36.17%	Myeloid differentiation primary response protein MyD88, putative [Pediculus humanus corporis]
NCBI nr blastx	gi\|157116787	7e-38	31.79%	myd88 [Aedes aegypti]

Group
Gene Ontology	GO:0031224	5.9e-20	intrinsic to membrane
	GO:0007165	5.9e-20	signal transduction
	GO:0004888	5.9e-20	transmembrane receptor activity
	GO:0045087	5.9e-20	innate immune response
	GO:0005515	1.4e-08	protein binding
KEGG pathway	aag:AaeL_AAEL007768	1e-37
	K04729 (MYD88)	maps->	Leishmaniasis
			Malaria
			Toll-like receptor signaling pathway
			Chagas disease
			Apoptosis
InterPro domain	[140-282] IPR000157	5.9e-20	Toll-Interleukin receptor
	[9-111] IPR011029	9.7e-12	DEATH-like
	[42-106] IPR000488	1.4e-08	Death
Orthology group	MCL12148		Single-copy universal gene

Nucleotide sequence:

>DPOGS205936-TA
ATGGTCGGTGATTTAAGGGCCGTGCCGTTGTCTGCGCTCTCATGTGAATCTCGAAACCTTTTATCCTCTCGTTTAAATGCCAAGAAGATTGTGCCAGTCGTCGGACACGACCAAATATCGCGACACAGGGACTGGAGAGGTTTAGCGTCACTTATCAATATATCGAGCGAAGCCGCAGCTAGTATAAGATGTAACGATCGCGAGGACAGGACGGACAAAGTTTTAAACATATGGATAAGCAGGAACGATGGCACCGCTACACTCGGTCGACTCATGGACTTTCTCCAAATACTTGACAGATTTGATGTTTCTGATGATATATTGGAATTGGCCAGGGATAATAAACTTATAGGAAATCACAATCAGATAGCATGTAATCCTGCGATAGTCCTGGATGGAGCGGACGATGACTTCATCACGAATGATGACAGGTTGTATGGCGTCCCGCAGCGGTATCATGCGTACGTGCTGTTTGCTAGGGAAGACAGAGACTTCGTTGATGAACTACTCAGACGGATGAGACAGGCCGGTTTCAAGCTGTGCACAGAAGACGACCTGATAGCGGGTCACGCGACGCCGTTCGAGCCGGTCTCCCGCCTGATAGCCGAGCGTTGTCGGAACATCGTCCTGGTGTACTCCCCGGACTTCCTCCAGAGCCCCGCCATCGCCTTCTACATGAACCTGGCGCAGGCGGACGCTATCAGCAAGAAGCAGCTGAAGATAGTGCCCGTGATGTACCGGGAGTGCAGCCTGCCGCGTCACCTCGCCTACTACACCAACCTGAGGTACGCGCCCCACTCGAGGGTCCCCTACGACTTCTGGGAGAGACTGTCCCAACGGCTCCGGATCTTTGATGGACCGAGGATCACAATGCCGAACTCCACCTCCAACACTGATATCAGAATAACGGAAACGTCACACAGTCTCAGCAACGGGCACCAGGTGAACGGCGCCATCAAGACATTGGCTTTACCGGAACTTCCGAAGGAGACATCATCCTTGACCAACCTTCACCGTCTCTCAGACGAGACGCCCACATCCTACGAGACGAAGTCACTCAACGGCTCGAGGGATTCTGACGACGGCAAGAAAAAATCTGGACCCTTCAGGAAGATCATGAACACGTTCAGATTAAAGAAACAAAAGAAGGCGATCAGCGTCGAAAATTAA

Protein sequence:

>DPOGS205936-PA
MVGDLRAVPLSALSCESRNLLSSRLNAKKIVPVVGHDQISRHRDWRGLASLINISSEAAASIRCNDREDRTDKVLNIWISRNDGTATLGRLMDFLQILDRFDVSDDILELARDNKLIGNHNQIACNPAIVLDGADDDFITNDDRLYGVPQRYHAYVLFAREDRDFVDELLRRMRQAGFKLCTEDDLIAGHATPFEPVSRLIAERCRNIVLVYSPDFLQSPAIAFYMNLAQADAISKKQLKIVPVMYRECSLPRHLAYYTNLRYAPHSRVPYDFWERLSQRLRIFDGPRITMPNSTSNTDIRITETSHSLSNGHQVNGAIKTLALPELPKETSSLTNLHRLSDETPTSYETKSLNGSRDSDDGKKKSGPFRKIMNTFRLKKQKKAISVEN-

Monarch geneset OGS2.0

Nucleotide sequence:

Protein sequence: