Monarch geneset OGS2.0

DPOGS205970
TranscriptDPOGS205970-TA729 bp
ProteinDPOGS205970-PA242 aa
Genomic positionDPSCF300164 - 276924-280046
RNAseq coverage75x (Rank: top 65%)
Annotation
HeliconiusHMEL0200682e-9874.15% 
BombyxBGIBMGA009398-TA2e-10674.79% 
DrosophilaHdacX-PA2e-7556.60% 
EBI UniRef50UniRef50_A7E3723e-8262.13%HDAC11 protein n=18 Tax=Eukaryota RepID=A7E372_BOVIN
NCBI RefSeqXP_002735241.12e-8461.98%PREDICTED: histone deacetylase 11-like [Saccoglossus kowalevskii]
NCBI nr blastpgi|2912305744e-8361.98%PREDICTED: histone deacetylase 11-like [Saccoglossus kowalevskii]
NCBI nr blastxgi|3017706411e-8162.98%PREDICTED: histone deacetylase 11-like [Ailuropoda melanoleuca]
Group
KEGG pathway 
InterPro domain[2-228] IPR0002865.1e-117Histone deacetylase superfamily
[14-227] IPR0238015e-49Histone deacetylase domain
Orthology groupMCL17285 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS205970-TA
ATGATAGCAGAAGTGCCAGTAATTGCCTGCGTACCCAATTTTTTAGTTCAAAAGGCCTATTTGAAACCTATGAGACTACAAACGGGGGGCACAATCTTAGCTGGTAAATTGGCTCTGGAGCGAGGCTGGGCAATCAATATAGGAGGTGGATTCCATCATTGTAGTGCGGGAAAGGGAGGTGGATTTTGTGCATATGCGGATATAACACTGCTTATCAAGAATTTAGTATTGCATAGGGGAGTCCAGAACACTATGATTGTCGATTTAGATGCGCATCAGGGTAATGGCTACCAGCATGACTTCCTCGGTATCCCGGAGGTGTATATAATGGATATGTATAACAGACACATCTATCCGAGAGACGAGGAAGCCAAGAGGGCCATTAGACGGAAGATAGAGCTCGGCAACAAGGTCGAAGACCTGGAATATATGATCAAGTTGAGGAAAAATCTGAGGGAAGCCTTAAAGGAGTTCAAACCTGATATCCTGGTGTATAACGCGGGCACTGATATCCTGGATTCAGATCCCTTAGGACATATGAGGATCAGTGATGTTGGTATCATAAAACGTGACGAGTTCGTGTTCGAGATCTGCAAGGAGCAAGACATTCCAGTAGTGATGCTGACCAGCGGTGGTTACTTAAGAAGAACAGCGAAAATTATAGCCGACTCTATAATGAATCTCAAGAACAAAGGCCTCATCGGATGTACAAGGTACCAAAAGTATTAG

Protein sequence:

>DPOGS205970-PA
MIAEVPVIACVPNFLVQKAYLKPMRLQTGGTILAGKLALERGWAINIGGGFHHCSAGKGGGFCAYADITLLIKNLVLHRGVQNTMIVDLDAHQGNGYQHDFLGIPEVYIMDMYNRHIYPRDEEAKRAIRRKIELGNKVEDLEYMIKLRKNLREALKEFKPDILVYNAGTDILDSDPLGHMRISDVGIIKRDEFVFEICKEQDIPVVMLTSGGYLRRTAKIIADSIMNLKNKGLIGCTRYQKY-