DPOGS205984 | ||
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Transcript | DPOGS205984-TA | 456 bp |
Protein | DPOGS205984-PA | 151 aa |
Genomic position | DPSCF300164 + 141066-143432 | |
RNAseq coverage | 43028x (Rank: top 0%) |
Annotation | ||||
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Heliconius | HMEL014866 | 9e-81 | 96.69% |   |
Bombyx | BGIBMGA009411-TA | 1e-79 | 96.03% |   |
Drosophila | RpS16-PA | 2e-72 | 86.39% |   |
EBI UniRef50 | UniRef50_P62249 | 4e-66 | 82.98% | 40S ribosomal protein S16 n=451 Tax=root RepID=RS16_HUMAN |
NCBI RefSeq | NP_001037508.1 | 5e-79 | 96.69% | ribosomal protein S16 [Bombyx mori] |
NCBI nr blastp | gi|54039446 | 1e-78 | 98.01% | ribosomal protein S16 [Spodoptera frugiperda] |
NCBI nr blastx | gi|54039446 | 1e-77 | 98.01% | ribosomal protein S16 [Spodoptera frugiperda] |
Group | ||||
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Gene Ontology | GO:0005840 | 3.2e-101 | ribosome | |
GO:0006412 | 3.2e-101 | translation | ||
GO:0005622 | 3.2e-101 | intracellular | ||
GO:0003735 | 3.2e-101 | structural constituent of ribosome | ||
KEGG pathway | ame:726439 | 9e-72 |   | |
  | K02960 (RP-S16e, RPS16) | maps-> | Ribosome | |
InterPro domain | [5-151] IPR000754 | 3.2e-101 | Ribosomal protein S9 | |
[13-151] IPR020568 | 2.1e-41 | Ribosomal protein S5 domain 2-type fold | ||
[15-151] IPR014721 | 3.7e-40 | Ribosomal protein S5 domain 2-type fold, subgroup | ||
Orthology group | MCL12081 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS205984-TA
ATGGCTGCCGCGCAAGAGGCGAGACGTGAACCTATTCAGGCCGTCCAAGTATTCGGACGCAAGAAAACAGCCACCGCCGTAGCGTACTGTAAACGCGGTCGTGGAGTCCTTCGAGTCAACGGTCGTCCCCTCGACTTAGTGGAGCCCCGTCTGCTCCAATACAAACTTCAAGAACCAATCCTGTTACTGGGAAAGGAAAAGTTCTCTGGCGTAGACATCAGAGTAACTGTGAAGGGTGGTGGTCATGTCGCTCAAGTTTATGCCATCAGACAAGCCATCTCCAAAGCACTAATAGCTTTCTACCAGAAATTTGTCGACGAGGCGTCAAAGAAGGAAATCAAAGATATCCTAGTTCAGTACGACAGGAGTTTGCTGGTCGCTGACCCGAGGCGCTGCGAGCCGAAGAAATTCGGTGGACCGGGAGCTCGGGCCAGATACCAGAAATCATACCGTTAA
>DPOGS205984-PA
MAAAQEARREPIQAVQVFGRKKTATAVAYCKRGRGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKFVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR-