Monarch geneset OGS2.0

DPOGS206041
TranscriptDPOGS206041-TA1434 bp
ProteinDPOGS206041-PA477 aa
Genomic positionDPSCF300028 - 1315181-1322990
RNAseq coverage1731x (Rank: top 7%)
Annotation
HeliconiusHMEL0087740.081.76% 
BombyxBGIBMGA000715-TA0.084.34% 
DrosophilaCG12262-PA0.068.11% 
EBI UniRef50UniRef50_P413672e-16363.35%Medium-chain specific acyl-CoA dehydrogenase, mitochondrial n=74 Tax=root RepID=ACADM_PIG
NCBI RefSeqXP_001985073.10.068.03%GH14704 [Drosophila grimshawi]
NCBI nr blastpgi|2839931330.078.78%acyl-CoA dehydrogenase [Heliothis virescens]
NCBI nr blastxgi|2839931330.078.36%acyl-CoA dehydrogenase [Heliothis virescens]
Group
Gene OntologyGO:00166274.6e-65oxidoreductase activity, acting on the CH-CH group of donors
GO:00551144.6e-65oxidation-reduction process
GO:00081526.2e-59metabolic process
GO:00039955.3e-39acyl-CoA dehydrogenase activity
GO:00506601.6e-27flavin adenine dinucleotide binding
KEGG pathwaydgr:Dgri_GH147040.0 
 K00249 (E1.3.99.3, ACADM, acd)maps-> Fatty acid metabolism
    Propanoate metabolism
    Valine, leucine and isoleucine degradation
    PPAR signaling pathway
    beta-Alanine metabolism
InterPro domain[308-471] IPR0090754.6e-65Acyl-CoA dehydrogenase/oxidase C-terminal
[149-333] IPR0091006.2e-59Acyl-CoA dehydrogenase/oxidase
[320-469] IPR0060901.1e-48Acyl-CoA oxidase/dehydrogenase, type 1
[210-307] IPR0060915.3e-39Acyl-CoA oxidase/dehydrogenase, central domain
[38-121] IPR0137861.6e-27Acyl-CoA dehydrogenase/oxidase, N-terminal
[41-124] IPR0060922.8e-18Acyl-CoA dehydrogenase, N-terminal
Orthology groupMCL11531 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS206041-TA
ATGAATCCTCTCACACAAGTGGTAAGGGCAACTCGTCCATTGTACCGTAAGCTGTCCACAACAGCGACGCTAGCATCGGCTCCAAAACCCATACCGCCAACAGGGTTATGTTTCGAGTTAAGCGAAGAGCAGAAAGCGTTGCAGGATCTGGCTCGGAAGTTCACCAAAGAGGAGATCATACCAGTGGCTGCTCAATACGATAAAAGCGGGGAATACCCGTGGCCGATCGTGAAGAAAGCATGGGAAGTCGGCCTCATGAATGGCCACATCCCAGAACATTGTGGAGGTTTAGGTTTAGGTGTGTCGGACAGTTGTCTTGTGTGTGAAGAGTTGGCCTTTGGCTGTGCCGGGGGCATTGGGAACTTCGGAGTTTTTGACGAATGCATTATCGGTGAAGAGTTCTCCTTTGGGTGTACCGGGATAGCCACTGCCGTTGGCGGGACGGGTGGTATGGACGTTGGTGTATTTGATGGGTGTTTGGTTGCCGAAGAGTTGGCATTCGGATGTACGGGGATCATGACAGCAATGGAAGCAAGCGGTCTGGGTCAAACCCCCGTCATCATAGCCGGTAACAAGGAACAACAGAAGAAATACCTCGGCAGGCTGATTGATGAGCCCTTAGTGGCGGCGTACTGTGTAACTGAACCGGGTGCCGGTTCAGACGTGGCCGGCGTCAAGACCAAGGCTGAGAAGAAAGGCGACGAATGGATCCTCAATGGTCAGAAGATGTGGATAACCAACGGCGGTGTAGCCAACTGGTACTTCGTGCTGGCTCGTACGAATCCTGATCCGAAGTGTCCAGCCAGCAAAGCCTTCACCGGCTTCATCGTGGAGAGAGATTGGCCTGGAGTTGTTCCTGGACGCAAAGAGCAGAACATGGGCCAGCGCGCGTCTGACACCCGCGGTATAACCTTTGAGGATGTCCGCATACCTAAAGAAAATGTCCTCATTGGTGAGGGCGCTGGTTTCAAGATAGCCATGGGAGCCTTCGACAAAACACGCCCACCGGTTGCCGCAGGAGCCACAGGTTTGGCCACTCGAGCTTTACACGAGGCCACTAAATACTCTTTGGAACGCAAGACTTTTGGGGTGCCAATCGCTCATCACCAAGCGGTTGCCTTTATGCTAGCTGATATGGCCATCGGTGTGGAAACTGCTAGACTGGCCTGGCAGAAGTCTGCATGGATGGTAGACCACGGCCAAAAGAACACAGTCTTGGCGTCTGTCGCTAAATGCTTTGCGTCCGAAGTGGCAAACAAGTCGGCCGCTGATGCAGTCCAAATATTTGGAGGAAACGGTTTCAATACAGAATATCCAGTAGAGAAACTTATGCGCGACGCTAAAATATACCAGATATATGAAGGAACCTCCCAAATACAAAGACTCATCATCTCCAGGGAGATTCTCACGGCAGCCAAGCAGAGTAACGCATAA

Protein sequence:

>DPOGS206041-PA
MNPLTQVVRATRPLYRKLSTTATLASAPKPIPPTGLCFELSEEQKALQDLARKFTKEEIIPVAAQYDKSGEYPWPIVKKAWEVGLMNGHIPEHCGGLGLGVSDSCLVCEELAFGCAGGIGNFGVFDECIIGEEFSFGCTGIATAVGGTGGMDVGVFDGCLVAEELAFGCTGIMTAMEASGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAAYCVTEPGAGSDVAGVKTKAEKKGDEWILNGQKMWITNGGVANWYFVLARTNPDPKCPASKAFTGFIVERDWPGVVPGRKEQNMGQRASDTRGITFEDVRIPKENVLIGEGAGFKIAMGAFDKTRPPVAAGATGLATRALHEATKYSLERKTFGVPIAHHQAVAFMLADMAIGVETARLAWQKSAWMVDHGQKNTVLASVAKCFASEVANKSAADAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIISREILTAAKQSNA-