| DPOGS206044 | ||
|---|---|---|
| Transcript | DPOGS206044-TA | 672 bp |
| Protein | DPOGS206044-PA | 223 aa |
| Genomic position | DPSCF300028 - 1270716-1273331 | |
| RNAseq coverage | 401x (Rank: top 30%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008775 | 1e-69 | 69.27% | |
| Bombyx | BGIBMGA000716-TA | 7e-92 | 90.70% | |
| Drosophila | ftz-f1-PB | 1e-72 | 72.94% | |
| EBI UniRef50 | UniRef50_P49867 | 3e-90 | 91.76% | Nuclear hormone receptor FTZ-F1 n=8 Tax=Pancrustacea RepID=FTZF1_BOMMO |
| NCBI RefSeq | NP_001037528.2 | 7e-91 | 91.76% | nuclear hormone receptor FTZ-F1 [Bombyx mori] |
| NCBI nr blastp | gi|17979670 | 1e-96 | 89.42% | nuclear hormone receptor betaFTZ-F1 [Manduca sexta] |
| NCBI nr blastx | gi|17979670 | 3e-94 | 90.37% | nuclear hormone receptor betaFTZ-F1 [Manduca sexta] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003707 | 1.6e-61 | steroid hormone receptor activity | |
| GO:0005634 | 1.6e-61 | nucleus | ||
| GO:0006355 | 1.6e-61 | regulation of transcription, DNA-dependent | ||
| GO:0043401 | 1.6e-61 | steroid hormone mediated signaling pathway | ||
| GO:0003700 | 1.6e-61 | sequence-specific DNA binding transcription factor activity | ||
| GO:0003677 | 1.1e-07 | DNA binding | ||
| KEGG pathway | ||||
| InterPro domain | [35-210] IPR008946 | 1.6e-61 | Nuclear hormone receptor, ligand-binding | |
| [23-171] IPR000536 | 1.7e-17 | Nuclear hormone receptor, ligand-binding, core | ||
| [33-49] IPR001723 | 1.1e-07 | Steroid hormone receptor | ||
| Orthology group | MCL12629 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS206044-TA
ATGCAACAAGCGACTTATGTGGGTCACGGAACGAGTGACGCCAACATCGGCTCCGACTTGTCAGATAGTGGTTCGGCTCGAGATAACACAGAAATTGTTAATGTAGACGATCAGATGAAGTTACTGCAGAATTCGTGGTCGGTGATGCTAGTGCTGGACCACCTGCATCAGCGGATGCACAACGGTCTGCCGGATGAGACGACGCTTCACAACGGCCAGAAGTTCGACCTGCTGTGTCTCGGATTGCTCGGTGTCCCATCACTAGCTGATCACTTCAACGAGCTCCAGAACAAACTTAGCGACCTCAAGTTCGATGTGTCCGACTACATCTGCGTCAAATTCCTTCTACTGCTTAATCCCGAGGTGAGGGGTATTGGGAACGTGAAGTGTGTGAGGGACGGCTATCACACGGTGCAGGCGGCCCTGCTCGACTACACGCTGACATGCTATCCCGGGATAACGGATAAATTCGGCAAATTAGTGATGGTTGTCCCTGAAATACACGCTCTGGCTGCACGCGGCGAGGAATACCTTTATCAGAGACATTGCGCCGGACAAGCGCCAATGCAAACATTACTCATGGAAATGCTACACGCTAAGCGCAAGCCCAATGTCGCCGAAATGGTTAACCGCAGCTCGGAGCACACGTCGACCCTAGACAGATTATCCTGA
>DPOGS206044-PA
MQQATYVGHGTSDANIGSDLSDSGSARDNTEIVNVDDQMKLLQNSWSVMLVLDHLHQRMHNGLPDETTLHNGQKFDLLCLGLLGVPSLADHFNELQNKLSDLKFDVSDYICVKFLLLLNPEVRGIGNVKCVRDGYHTVQAALLDYTLTCYPGITDKFGKLVMVVPEIHALAARGEEYLYQRHCAGQAPMQTLLMEMLHAKRKPNVAEMVNRSSEHTSTLDRLS-