Monarch geneset OGS2.0

DPOGS206101
TranscriptDPOGS206101-TA846 bp
ProteinDPOGS206101-PA281 aa
Genomic positionDPSCF300028 + 202716-204096
RNAseq coverage335x (Rank: top 34%)
Annotation
HeliconiusHMEL0057742e-10867.80% 
BombyxBGIBMGA006827-TA3e-3856.80% 
DrosophilaCG14285-PA5e-2227.94% 
EBI UniRef50UniRef50_E0VX682e-2530.42%Polyadenylation factor subunit, putative n=1 Tax=Pediculus humanus corporis RepID=E0VX68_PEDHC
NCBI RefSeqXP_002430712.13e-2630.42%Polyadenylation factor subunit, putative [Pediculus humanus corporis]
NCBI nr blastpgi|3323740043e-2531.19%unknown [Dendroctonus ponderosae]
NCBI nr blastxgi|3323740049e-2731.14%unknown [Dendroctonus ponderosae]
Group
Gene OntologyGO:00055152.8e-17protein binding
KEGG pathway 
InterPro domain[16-260] IPR0110462.8e-17WD40 repeat-like-containing domain
[177-247] IPR0159431.5e-12WD40/YVTN repeat-like-containing domain
Orthology groupMCL17757 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS206101-TA
ATGACTCTTCTAGTTAAAACGGAAAGGAAAATCGACTCGGAACCTTGCTTAGCCACATGGAGCGAAAAATTAATTGTTGGTACTGATAACGGTTTTATTAATACCTATGATGAACATCTGAATCCCAGTTCTTCATGGATGGCTCACGGGGTTCAGTTATTTGCATTAGCAGCTAGTGAAGGAAAAGTTTATTCAGCTTCCAACGATGGCGGAGTAAGGGTATGGACATCAGCAGGTGACAAAATTTCGGAATTGCCACCTCCTGACGGTGATATAGGATCCCTGTGTGTGTTCGGTAAATTATTATATGCTGGCGATGAATTAGGGAATGTGTATGTTTTCGAGGACACTAACTTAAAAGCTAAATACAATGTTCTGGAGGAAGTAAAAGATCTCGAAATAAGTCCACCTTTTATGTTTACGGCTCGTGATCTCTATGTGACGGTTACTGAAATTAAACCTGATGTATCAAAAGACCGATTTGTCACCCAACATGTTATGGAGGGACGTGCTCCCTTGAGGATAAGCGGATCGAAACTTGTTGTAACAGGACGAGGTGGTAATAACATTCAACTCCACGAGTTATCTTTAGAGAAAAAGTTTAACAAGCTACATGAGGTCAAGGTCAGTGACATGATATTAACGAGTTTGGCAGTAGTTGGAAATATGGTGTGGACTGGAGGATGGGATGGCTGTATGCGCAGGTGGAAAATAGACCAAGATAAATTGCATCCTGACGGGGAAATAAACCTTGGTACATGTATTAATTCCTTAGTTGCAACTACTGAAGCTAATGCCTATGCACTTTTGAGCGACAAGAGAATTGTTAATGTTGTAGCAAAATAA

Protein sequence:

>DPOGS206101-PA
MTLLVKTERKIDSEPCLATWSEKLIVGTDNGFINTYDEHLNPSSSWMAHGVQLFALAASEGKVYSASNDGGVRVWTSAGDKISELPPPDGDIGSLCVFGKLLYAGDELGNVYVFEDTNLKAKYNVLEEVKDLEISPPFMFTARDLYVTVTEIKPDVSKDRFVTQHVMEGRAPLRISGSKLVVTGRGGNNIQLHELSLEKKFNKLHEVKVSDMILTSLAVVGNMVWTGGWDGCMRRWKIDQDKLHPDGEINLGTCINSLVATTEANAYALLSDKRIVNVVAK-