| DPOGS206148 | ||
|---|---|---|
| Transcript | DPOGS206148-TA | 498 bp |
| Protein | DPOGS206148-PA | 165 aa |
| Genomic position | DPSCF300028 + 1509603-1511490 | |
| RNAseq coverage | 91x (Rank: top 63%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL013477 | 1e-67 | 80.75% | |
| Bombyx | BGIBMGA000709-TA | 4e-80 | 100.00% | |
| Drosophila | Frq2-PA | 1e-91 | 95.76% | |
| EBI UniRef50 | UniRef50_B4MSM4 | 1e-90 | 95.76% | GK20001 n=12 Tax=Opisthokonta RepID=B4MSM4_DROWI |
| NCBI RefSeq | XP_002064127.1 | 3e-91 | 95.76% | GK20001 [Drosophila willistoni] |
| NCBI nr blastp | gi|195432226 | 4e-90 | 95.76% | GK20001 [Drosophila willistoni] |
| NCBI nr blastx | gi|195432226 | 6e-89 | 95.76% | GK20001 [Drosophila willistoni] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005509 | 5.6e-51 | calcium ion binding | |
| KEGG pathway | cfa:489500 | 1e-39 | ||
| K13764 (RCVRN) | maps-> | Phototransduction | ||
| InterPro domain | [1-162] IPR011992 | 5.6e-51 | EF-hand-like domain | |
| [46-67] IPR001125 | 9.2e-48 | Recoverin | ||
| [46-68] IPR018248 | 5.6e-07 | EF-hand | ||
| Orthology group | MCL15329 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS206148-TA
ACTGAGAAGGAAATACGACTCTGGCACAAAGGCTTTTTGAAGGATTGTCCTAACGGCCTCCTCACTGAGCAGGGATTCATAAAGATCTACAAACAATTCTTCCCTCAAGGTGACCCGAGCAAATTCGCCTCCTTAGTCTTTCGGGTCTTCGACGAAAACAACGATGGCTCGATCGAGTTTGAGGAGTTTATACGAGCCTTATCGGTGACGTCACGAGGAAATCTTGATGAAAAGTTACATTGGGCATTCCGTCTTTATGACGTAGATAACGACGGCTATATAACGAGAGACGAGATGTACAACATCGTTGACGCGATCTACCAGATGGTGGGTCAGACCCCCCAGCCGGAGGACGAGAACACACCACAGAAGCGCGTGGACAAGATCTTCGATCAGATGGACAAGAACCACGATGATCGTCTCACTTTGGAGGAGTTCCGCGAAGGCAGCAAGGCCGACCCCCGTATTGTACAGGCTCTGTCACTCGGAGGTGATTAA
>DPOGS206148-PA
TEKEIRLWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPSKFASLVFRVFDENNDGSIEFEEFIRALSVTSRGNLDEKLHWAFRLYDVDNDGYITRDEMYNIVDAIYQMVGQTPQPEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGGD-