DPOGS206149 | ||
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Transcript | DPOGS206149-TA | 828 bp |
Protein | DPOGS206149-PA | 275 aa |
Genomic position | DPSCF300028 + 1522654-1529766 | |
RNAseq coverage | 1085x (Rank: top 12%) |
Annotation | ||||
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Heliconius | HMEL013475 | 8e-98 | 69.04% |   |
Bombyx | BGIBMGA000710-TA | 5e-92 | 70.28% |   |
Drosophila | Vap-33-1-PB | 3e-32 | 35.42% |   |
EBI UniRef50 | UniRef50_D6WHU6 | 3e-57 | 45.99% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WHU6_TRICA |
NCBI RefSeq | XP_966498.1 | 5e-58 | 45.99% | PREDICTED: similar to VAMP-associated protein, putative [Tribolium castaneum] |
NCBI nr blastp | gi|91079178 | 9e-57 | 45.99% | PREDICTED: similar to VAMP-associated protein, putative [Tribolium castaneum] |
NCBI nr blastx | gi|91079178 | 2e-55 | 45.26% | PREDICTED: similar to VAMP-associated protein, putative [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0005198 | 6.6e-27 | structural molecule activity | |
KEGG pathway | bfo:BRAFLDRAFT_68601 | 2e-39 |   | |
  | K06096 (VAPA) | maps-> | Tight junction | |
InterPro domain | [1-275] IPR016763 | 6.3e-47 | Vesicle-associated membrane protein | |
[1-127] IPR008962 | 3.6e-42 | PapD-like | ||
[6-109] IPR000535 | 6.6e-27 | Major sperm protein | ||
Orthology group | MCL11718 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206149-TA
ATGCCTAACCAAGTGTTAATTATAGAGCCGCAAAATGAACTGAAGTTTAAAATTGATTATTCAGGCTTCTTTGATATGGGATGCACTACTTATATGAAACTGACGAATCCAACTGATCATACCGTGTTGTTTAAAATTAAGACAACAGCACCAAAGAAGTATTGTGTGAGACCCAATTCAGGGTTTTTGGATCCAAAATCTAAAGTTGATATAGCTATTACCCCTCAACCTGTAAATGTTGAGTCCAATGAGAAAAATAAACACAAGTTTATGGTGCAAAGTGTTATTGCTCCAGAGGGGAAAATTAACATAGATCAAGTGTGGAAGGAAATAAATCCTAAACAGCTCATGGATTATAAATTAAAGTGTGTCTTTGAAACGCCACAAGTAAAAAGCGCTAATGATTCCGGTGACAACGCAGCGGCGAACGAAGTCACCAAGAAGAGGGTGGCTGTGGCCGACGAGTCAAAACCAGCTGTGAAGGACTCTGACGGTGTCCAGAGCGAATCGAACAGACGGGATCCGGACGCGGCGGTGAACCAGTCGACGGATGTTTTACAAAAATCTGAAAATCTCGAAAGCGATTTGCAAAAGGCGACGAATGAAGTCATTCATTTGAGGGAGGAGGAAAGTATTTTAAGACACGAAAATCTCCGATTAAAAGAGGAGTTGTTGCGTTTGCACCAGGGCGGTGCCGGTGAGGGCCGTCCCGCGCGCGGCCACTCGTACGGCCCGGAGAAGACGGAACACGCGGCGCTCATGGCATGGGTGGCCACCGCCATAGCCATGGCATTACTCGGCATCATCATCGGCAAGTTCATCATGTGA
>DPOGS206149-PA
MPNQVLIIEPQNELKFKIDYSGFFDMGCTTYMKLTNPTDHTVLFKIKTTAPKKYCVRPNSGFLDPKSKVDIAITPQPVNVESNEKNKHKFMVQSVIAPEGKINIDQVWKEINPKQLMDYKLKCVFETPQVKSANDSGDNAAANEVTKKRVAVADESKPAVKDSDGVQSESNRRDPDAAVNQSTDVLQKSENLESDLQKATNEVIHLREEESILRHENLRLKEELLRLHQGGAGEGRPARGHSYGPEKTEHAALMAWVATAIAMALLGIIIGKFIM-