Monarch geneset OGS2.0

DPOGS206149
TranscriptDPOGS206149-TA828 bp
ProteinDPOGS206149-PA275 aa
Genomic positionDPSCF300028 + 1522654-1529766
RNAseq coverage1085x (Rank: top 12%)
Annotation
HeliconiusHMEL0134758e-9869.04% 
BombyxBGIBMGA000710-TA5e-9270.28% 
DrosophilaVap-33-1-PB3e-3235.42% 
EBI UniRef50UniRef50_D6WHU63e-5745.99%Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WHU6_TRICA
NCBI RefSeqXP_966498.15e-5845.99%PREDICTED: similar to VAMP-associated protein, putative [Tribolium castaneum]
NCBI nr blastpgi|910791789e-5745.99%PREDICTED: similar to VAMP-associated protein, putative [Tribolium castaneum]
NCBI nr blastxgi|910791782e-5545.26%PREDICTED: similar to VAMP-associated protein, putative [Tribolium castaneum]
Group
Gene OntologyGO:00051986.6e-27structural molecule activity
KEGG pathwaybfo:BRAFLDRAFT_686012e-39 
 K06096 (VAPA)maps-> Tight junction
InterPro domain[1-275] IPR0167636.3e-47Vesicle-associated membrane protein
[1-127] IPR0089623.6e-42PapD-like
[6-109] IPR0005356.6e-27Major sperm protein
Orthology groupMCL11718 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS206149-TA
ATGCCTAACCAAGTGTTAATTATAGAGCCGCAAAATGAACTGAAGTTTAAAATTGATTATTCAGGCTTCTTTGATATGGGATGCACTACTTATATGAAACTGACGAATCCAACTGATCATACCGTGTTGTTTAAAATTAAGACAACAGCACCAAAGAAGTATTGTGTGAGACCCAATTCAGGGTTTTTGGATCCAAAATCTAAAGTTGATATAGCTATTACCCCTCAACCTGTAAATGTTGAGTCCAATGAGAAAAATAAACACAAGTTTATGGTGCAAAGTGTTATTGCTCCAGAGGGGAAAATTAACATAGATCAAGTGTGGAAGGAAATAAATCCTAAACAGCTCATGGATTATAAATTAAAGTGTGTCTTTGAAACGCCACAAGTAAAAAGCGCTAATGATTCCGGTGACAACGCAGCGGCGAACGAAGTCACCAAGAAGAGGGTGGCTGTGGCCGACGAGTCAAAACCAGCTGTGAAGGACTCTGACGGTGTCCAGAGCGAATCGAACAGACGGGATCCGGACGCGGCGGTGAACCAGTCGACGGATGTTTTACAAAAATCTGAAAATCTCGAAAGCGATTTGCAAAAGGCGACGAATGAAGTCATTCATTTGAGGGAGGAGGAAAGTATTTTAAGACACGAAAATCTCCGATTAAAAGAGGAGTTGTTGCGTTTGCACCAGGGCGGTGCCGGTGAGGGCCGTCCCGCGCGCGGCCACTCGTACGGCCCGGAGAAGACGGAACACGCGGCGCTCATGGCATGGGTGGCCACCGCCATAGCCATGGCATTACTCGGCATCATCATCGGCAAGTTCATCATGTGA

Protein sequence:

>DPOGS206149-PA
MPNQVLIIEPQNELKFKIDYSGFFDMGCTTYMKLTNPTDHTVLFKIKTTAPKKYCVRPNSGFLDPKSKVDIAITPQPVNVESNEKNKHKFMVQSVIAPEGKINIDQVWKEINPKQLMDYKLKCVFETPQVKSANDSGDNAAANEVTKKRVAVADESKPAVKDSDGVQSESNRRDPDAAVNQSTDVLQKSENLESDLQKATNEVIHLREEESILRHENLRLKEELLRLHQGGAGEGRPARGHSYGPEKTEHAALMAWVATAIAMALLGIIIGKFIM-