DPOGS206286 | ||
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Transcript | DPOGS206286-TA | 666 bp |
Protein | DPOGS206286-PA | 221 aa |
Genomic position | DPSCF300290 + 241952-245787 | |
RNAseq coverage | 360x (Rank: top 33%) |
Annotation | ||||
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Heliconius | HMEL016904 | 1e-86 | 93.21% |   |
Bombyx | BGIBMGA010745-TA | 3e-89 | 95.65% |   |
Drosophila | CG11920-PA | 2e-44 | 52.80% |   |
EBI UniRef50 | UniRef50_E5S6G5 | 1e-43 | 50.57% | U3 small nucleolar ribonucleoprotein IMP4 n=6 Tax=Bilateria RepID=E5S6G5_TRISP |
NCBI RefSeq | XP_972242.2 | 2e-71 | 80.75% | PREDICTED: similar to U3 small nucleolar ribonucleoprotein component [Tribolium castaneum] |
NCBI nr blastp | gi|189241108 | 3e-70 | 80.75% | PREDICTED: similar to U3 small nucleolar ribonucleoprotein component [Tribolium castaneum] |
NCBI nr blastx | gi|189241108 | 5e-68 | 80.75% | PREDICTED: similar to U3 small nucleolar ribonucleoprotein component [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0005524 | 4.5e-31 | ATP binding | |
GO:0004812 | 4.5e-31 | aminoacyl-tRNA ligase activity | ||
KEGG pathway |   | |||
InterPro domain | [94-185] IPR004154 | 4.5e-31 | Anticodon-binding | |
[99-161] IPR007109 | 8.1e-14 | Brix domain | ||
Orthology group | MCL13983 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206286-TA
ATGCTCCGACGGCAGGCGCGTTTGCGCCGTGAATATCTGTATAGGAAATCAGTGGAGGACAAACAGAAGAGTATCCAAGCAAAGAAAGATCAATTGAAACGTAGCTTAGAAGAAAACATTCCGATACACGGGGATCTAAGAAAAGAGGCGCTCGCTTTACAGAAGAGAATAGAATACGAAGATAAAGGTCCGGAGAGAGCTGCGGTGATTGGTGGTTTCAGTGGTGGCGCTAACACCTTGAATTCACAGGATGATGAATATAGATATGCTGGTGTCGAGGATCCTAAGATCATGATAACCACCTCCAGAGAACCGAGCGCCAGGCTGAAGATGTTTGTCAAGGAATTAAGACTAATCTTCCCGAACAGCCAGCGAATGAATCGCGGTGGTTATGAAATGTCTCAGCTGATCCACGCCTGCCGAGCTAATGACGTAACGGACTTCATCGTAGTACATGAACACAGAGGCATACCTGACAGCCTGTCTGGCAAAGAAATTGAACTGTCAGAAATCGGACCACGTTTCCAAATGAAGTTGTACGAAATAAAATTGGGTACTCTGGAAGCTTTGGACGCAGCAGACACGGAATGGGCATTGAGACCTTACATGAACACATCCAGCAAGAGACGGTTCCTGAGTAACGATGATGGCTGGACAGAGGAGTGA
>DPOGS206286-PA
MLRRQARLRREYLYRKSVEDKQKSIQAKKDQLKRSLEENIPIHGDLRKEALALQKRIEYEDKGPERAAVIGGFSGGANTLNSQDDEYRYAGVEDPKIMITTSREPSARLKMFVKELRLIFPNSQRMNRGGYEMSQLIHACRANDVTDFIVVHEHRGIPDSLSGKEIELSEIGPRFQMKLYEIKLGTLEALDAADTEWALRPYMNTSSKRRFLSNDDGWTEE-