Monarch geneset OGS2.0

DPOGS206370
TranscriptDPOGS206370-TA573 bp
ProteinDPOGS206370-PA190 aa
Genomic positionDPSCF300192 - 260935-262391
RNAseq coverage1747x (Rank: top 7%)
Annotation
HeliconiusHMEL0090245e-9787.37% 
BombyxBGIBMGA005769-TA7e-7788.59% 
DrosophilaSsRbeta-PA9e-6358.73% 
EBI UniRef50UniRef50_C4N1884e-6158.42%Translocon-associated complex TRAP, beta subunit (Fragment) n=1 Tax=Stomoxys calcitrans RepID=C4N188_STOCA
NCBI RefSeqNP_001040332.15e-9284.21%signal sequence receptor beta subunit [Bombyx mori]
NCBI nr blastpgi|1140529418e-9184.21%signal sequence receptor beta subunit precursor [Bombyx mori]
NCBI nr blastxgi|1140529411e-8784.21%signal sequence receptor beta subunit precursor [Bombyx mori]
Group
Gene OntologyGO:00057836.8e-107endoplasmic reticulum
GO:00160216.8e-107integral to membrane
KEGG pathwaytca:6580716e-68 
 K13250 (SSR2)maps-> Protein processing in endoplasmic reticulum
InterPro domain[1-189] IPR0088566.8e-107Translocon-associated beta
Orthology groupMCL13573 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS206370-TA
ATGATTGCTAAATTATTGTCGGTGTTTCTGCTCCTGGCTGCGGCTTTCGCAGCGGAGGAAGAGCCAGCGGTCGCGAGATTATTAATATCTAAACAAGTGTTAAACAAATATTTAGTTGAAAACATGGACATTTTAATAAAGTACACATTATTCAACGTGGGTACAGCCCCAGCTGTGGATGTTAAACTTGTAGATAATGGATTCCATCCCGAAGTTTTCGCAGTGGTTGGAGGACAGCTCTCAGCTCACATAGACAGGATACCACCCCAAACTAATGTCTCACACGTCGTTACTGTAAGATCCAACAGATATGGCTACTTCAACTTCACAGCAGCAGAAGTAACATACAAACCCAGTGAAGATTCTGCCGAGGTTCAATACTCAATCAGTAGTGCCCCCGGTGAAGGCACAATCGTAGCCTTCAAGGACTATGACCGCAAGTTCTCATCTCACATCCTGGACTGGGCGGCCTTTGCTGTTATGACACTCCCATCACTGGCTATCCCCTTCGGACTTTGGTATTCATCTAAGAGCAAATACGAGAAACTCTCGAAACCTAAAAAGACTCACTAG

Protein sequence:

>DPOGS206370-PA
MIAKLLSVFLLLAAAFAAEEEPAVARLLISKQVLNKYLVENMDILIKYTLFNVGTAPAVDVKLVDNGFHPEVFAVVGGQLSAHIDRIPPQTNVSHVVTVRSNRYGYFNFTAAEVTYKPSEDSAEVQYSISSAPGEGTIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWYSSKSKYEKLSKPKKTH-