| DPOGS206427 | ||
|---|---|---|
| Transcript | DPOGS206427-TA | 588 bp |
| Protein | DPOGS206427-PA | 195 aa |
| Genomic position | DPSCF300181 + 314999-317516 | |
| RNAseq coverage | 19838x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | BGIBMGA013792-TA | 4e-111 | 98.97% | |
| Drosophila | RpS11-PC | 1e-62 | 77.63% | |
| EBI UniRef50 | UniRef50_A6YPG5 | 1e-89 | 83.08% | 40S ribosomal protein S11 n=14 Tax=Eukaryota RepID=A6YPG5_TRIIF |
| NCBI RefSeq | NP_001037111.1 | 9e-75 | 97.79% | ribosomal protein S11 isoform 2 [Bombyx mori] |
| NCBI nr blastp | gi|149898798 | 5e-89 | 83.08% | 40S ribosomal protein S11 [Triatoma infestans] |
| NCBI nr blastx | gi|270010086 | 3e-91 | 84.62% | hypothetical protein TcasGA2_TC009438 [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 4.3e-97 | ribosome | |
| GO:0006412 | 4.3e-97 | translation | ||
| GO:0005622 | 4.3e-97 | intracellular | ||
| GO:0003735 | 4.3e-97 | structural constituent of ribosome | ||
| KEGG pathway | dgr:Dgri_GH22980 | 6e-73 | ||
| K02949 (RP-S11e, RPS11) | maps-> | Ribosome | ||
| InterPro domain | [44-195] IPR000266 | 4.3e-97 | Ribosomal protein S17 | |
| [105-188] IPR012340 | 1.1e-35 | Nucleic acid-binding, OB-fold | ||
| [93-182] IPR019978 | 1.4e-32 | Ribosomal protein S17, archaeal | ||
| [106-187] IPR016027 | 1.8e-28 | Nucleic acid-binding, OB-fold-like | ||
| Orthology group | MCL15244 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS206427-TA
ATGGCGGATCAGACCGAACGTTCGTTTCAAAAGCAACCGACTGTCTTCTTGAACCGTAAGAAAGGCATCGGTGTCAAACGAAGCAGGAAACCGCTAAGATATCATAAAGATGTCGGACTCGGTTTCAAGACACCCAGAGAGACAGAGAAAGCGTTTCAGAAACAGGCTACGGTTTTCCTGAACCGTAAAGGCGGTTTGAAGAGGAAGGATATGAGACACCACAAAAATGTCGGTTTAGGTTTCAAGACGCCGCGTGAGGCAATTGAGGGCACATACATTGATAAGAAGTGTCCATTCACTGGGAATGTTTCCATCCGAGGCAGAATCCTAACTGGTGTCGTACAGAAGATGAAAATGCAGAGAACCATTGTCATCCGACGCGATTACCTACACTACCTGCCAAAATACAACCGTTTTGAGAAACGACACAGGAATATGTCCGTTCATCTATCACCCTGTTTCAGGGATGTTGAACTCGGAGACATCGTTACCATCGGCGAGTGCCGGCCGCTGTCCAAGACTGTGCGTTTCAACGTTCTCAAGGTCTCCAAGGGAAAAGGCTCCAAAAAGTCTTTCAAAAAATTCTAA
>DPOGS206427-PA
MADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPRETEKAFQKQATVFLNRKGGLKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVELGDIVTIGECRPLSKTVRFNVLKVSKGKGSKKSFKKF-