MonarchBase - Protein-coding gene

DPOGS206431
Transcript	DPOGS206431-TA	927 bp
Protein	DPOGS206431-PA	308 aa
Genomic position	DPSCF300070 - 896083-899053
RNAseq coverage	1134x (Rank: top 11%)

Annotation
*Heliconius*	HMEL012700	1e-69	86.67%
*Bombyx*	BGIBMGA005438-TA	9e-61	82.09%
*Drosophila*	RnpS1-PA	4e-33	63.86%
EBI UniRef50	UniRef50_F4WSE5	1e-43	68.50%	RNA-binding protein with serine-rich domain 1-A n=5 Tax=Formicidae RepID=F4WSE5_ACREC
NCBI RefSeq	NP_001040150.1	1e-65	81.76%	ribonucleic acid binding protein S1 [Bombyx mori]
NCBI nr blastp	gi\|114050961	3e-64	81.76%	ribonucleic acid binding protein S1 [Bombyx mori]
NCBI nr blastx	gi\|114050961	1e-130	85.76%	ribonucleic acid binding protein S1 [Bombyx mori]

Group
Gene Ontology	GO:0000166	1.2e-19	nucleotide binding
	GO:0003676	2.9e-19	nucleic acid binding
KEGG pathway	clu:CLUG_03443	2e-09
	K11294 (NCL)	maps->	Pathogenic Escherichia coli infection
InterPro domain	[142-243] IPR012677	1.2e-19	Nucleotide-binding, alpha-beta plait
	[165-239] IPR000504	2.9e-19	RNA recognition motif domain
Orthology group	MCL25136		Lepidoptera specific

Nucleotide sequence:

>DPOGS206431-TA
ATGTGGACGTTTATTAGTGAAGAAAAAAATGTTTACTCAATACCACATAGGGCACGAAACAAATCTCCTTCAGTTACATCGGAAAAAGAAAAGAAGAAACCAAAGGATAAAAAGAAAAAAGGTGATTCGGGATCCAGCAGTAGTGAAAGTAGTGGAAGTTCTTCGGAAAGTAGTTCGTCCAGGTCTTCATCGCGTTCATCATCAAGTAGTTCTGGTAGCTCGTCACGATCTTCTTCAAGTTCCAGCTCGTCCAGCAGCAGTAGCAGTAACAATGATAGATCCAGAGCTAAGAAAAAGATTTCACCAAACAAAAGTCCAGTTAAAGATAGAAGGGAGGGAGCTGATAGGGATAAGGCGAGAGATAGATCACCTCTGAGTGATAAAAAAAAATTAGCACCACCATCAGCTAATGACAAGGTCAAAAATAAAGAGAAACATGAAAGGTCACCAGGTCGTAAAAAACGTGAACGTTCACCACCCCCGCGTCCCACTAGAATACATATAGGACGTCTAACATTAAATGTAAGCAGAGATCATATTCATGAAATCTTCTCAACTTATGGCACCGTAAAAGCTGTGGAGTTTCCCATGGACAGACTGCATCCTCATAATGGGCGAGGGTATGCTTATGTGGAATTCAGCAACCCCGATGAAGCCGAAAACGCTATGAAGCATATGGATGGAGGTCAGATCGACGGTCAAGAGATCACAGCGGCGCCCGTGTTGGTGCCGTCCCGTCCGAGACGGCCTTCGCCTCGTCCGCCGCCACGACACGCTCCGCCGAGACGACACTCCCCACCACGGTACCGTCGTCGTAGTCCTCCGCGGCGTCGCTCTCCTCCTCGTCGTCGTCGGTCTCGATCACGTTCCCCGCGCGTCGCCCCCCGCAGACGACGCTCAAGGTCCTCCTCATCTTCCTCCCGGTAG

Protein sequence:

>DPOGS206431-PA
MWTFISEEKNVYSIPHRARNKSPSVTSEKEKKKPKDKKKKGDSGSSSSESSGSSSESSSSRSSSRSSSSSSGSSSRSSSSSSSSSSSSSNNDRSRAKKKISPNKSPVKDRREGADRDKARDRSPLSDKKKLAPPSANDKVKNKEKHERSPGRKKRERSPPPRPTRIHIGRLTLNVSRDHIHEIFSTYGTVKAVEFPMDRLHPHNGRGYAYVEFSNPDEAENAMKHMDGGQIDGQEITAAPVLVPSRPRRPSPRPPPRHAPPRRHSPPRYRRRSPPRRRSPPRRRRSRSRSPRVAPRRRRSRSSSSSSR-

Monarch geneset OGS2.0

Nucleotide sequence:

Protein sequence: