DPOGS206498 | ||
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Transcript | DPOGS206498-TA | 624 bp |
Protein | DPOGS206498-PA | 207 aa |
Genomic position | DPSCF300367 - 92191-99070 | |
RNAseq coverage | 1067x (Rank: top 12%) |
Annotation | ||||
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Heliconius | HMEL006607 | 1e-59 | 80.11% |   |
Bombyx | BGIBMGA012721-TA | 5e-27 | 63.16% |   |
Drosophila | vg-PA | 7e-10 | 71.79% |   |
EBI UniRef50 | UniRef50_C8KHR1 | 8e-19 | 41.55% | Vestigial n=1 Tax=Henosepilachna vigintioctopunctata RepID=C8KHR1_9CUCU |
NCBI RefSeq | XP_002432791.1 | 1e-12 | 57.97% | protein vestigial, putative [Pediculus humanus corporis] |
NCBI nr blastp | gi|259647940 | 3e-18 | 41.55% | vestigial [Henosepilachna vigintioctopunctata] |
NCBI nr blastx | gi|259647940 | 6e-22 | 40.78% | vestigial [Henosepilachna vigintioctopunctata] |
Group | ||||
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Gene Ontology | GO:0005634 | 9.8e-15 | nucleus | |
GO:0006355 | 9.8e-15 | regulation of transcription, DNA-dependent | ||
KEGG pathway |   | |||
InterPro domain | [147-176] IPR011520 | 9.8e-15 | Vestigial/tondu | |
Orthology group | MCL22304 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206498-TA
ATGGCGGTGAGCTGCCCCGAGGTGATGTACGGCGCCTACTACCCTTACCTCTACGGCCGCGGCGCCGCGCGCTCCTTCCACCACGCGCCGCACTTCCAGTACGACCGGCTGAACGTGCAGAGTGCCGGAAATGCGGGAGAGTACGGCGGTGGCGGCGCGGGAAGCGGCTCAGCCTCCGCCGGCGGCGCGCCCGCCCTCAGCTCAGGCTCGGCGTCGTCTGGCGCGCAGTCCCCGGGCTCGCCTTTACCGCAGCACGCGCACGTCCACCCCCAGACCCACGCTCACCTCGTCCACGCTCACTCGCTGCCGCCGCAGCATCACTCTCCTCGGCTGCGGACCAAGGAGGAGGATCTCTCCGCTCACGGCCGGGCCAGCGCCGACGGCGGCGGCTCGTCGGAGTCGGAGGGCGACTGCGGCGGCGGGCCCCGGGGCCGGGCGCAGTATGTCAGCGCCAACTGTGTGGTGTTCACACACTACTCGGGGGACGTGGCGGCCGTTGTCGACGACCACTTCACACGGGCGCTGTCCCTCGACAAACAGAAAGGTACCACCTCCACCACCTCCCTCACAGAGACCATGGTTCGACTCTCTAAAATGACTGACACAACTTCGCGAGTATCATAG
>DPOGS206498-PA
MAVSCPEVMYGAYYPYLYGRGAARSFHHAPHFQYDRLNVQSAGNAGEYGGGGAGSGSASAGGAPALSSGSASSGAQSPGSPLPQHAHVHPQTHAHLVHAHSLPPQHHSPRLRTKEEDLSAHGRASADGGGSSESEGDCGGGPRGRAQYVSANCVVFTHYSGDVAAVVDDHFTRALSLDKQKGTTSTTSLTETMVRLSKMTDTTSRVS-